Penicillium digitatum: PDIP_44880
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Entry
PDIP_44880 CDS
T04849
Name
(RefSeq) DNA repair protein Rad50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pdp
Penicillium digitatum
Pathway
pdp03440
Homologous recombination
pdp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PDIP_44880
03450 Non-homologous end-joining
PDIP_44880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdp03032
]
PDIP_44880
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_44880
DNA replication proteins [BR:
pdp03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
PDIP_44880
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
PDIP_44880
BRCA1-C complex
PDIP_44880
NHEJ (non-homologous end-joining)
MRX complex
PDIP_44880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SbcC_Walker_B
AAA_23
AAA_21
KNOX2
Motif
Other DBs
NCBI-GeneID:
26232806
NCBI-ProteinID:
XP_014534778
UniProt:
K9G008
A0A7T6XRL6
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MVATRSLQLTVKKTTRQQKTLEGQLLMVKNGERTAISSRVAELDQIMPQYLGVSKAVLDS
VIFCHQDESLWPMSEPSVLKKRFDEIFEALKYTKAIDNIKALRKKQNEELGKYKIMEQHA
KEDKDKADRAEKRSVKLQDEIEALREETQRMSQEMRRVAELADKAWTQSESFAQVLGALE
GKRIEAKSIQTTIDNLKRHLIELDDSDEWLESTLEQFETKQVQYQQQEESQKESYMEIKD
QIEQTRHRLGLKQAENGKFENDKANFERQSQRRQNMINEIARANNIRGLGEKIDQSEIDT
FMQKIKRLLREQNQSLDRVKREAQRELREVQETLNEIGQRKSALQETKNAAKRQIAANEN
EATTYQKKLNEIEVDEGFQAALESKVEDITSNLEHAKDRAKTASWDQDIQDANAEIRRLE
DENSRLNSELIDSTKKAGELARLDHLKKESKDRERSLQTMKGAYSDRLEKAIGSDWKPET
LERGFQQALDIESKQVADVERERDGVSRELEHVEFKLKTAKKNLKQQQKELDECVKEIHN
AVDAEPSEYPEIVKERQAQYDLARKDADQYAGMGEYLTKCLDAAKRTKLCRTCQRSFKNE
AELQTFTKKLDALVKKAGLDAEDETLKSLEEDLETARAASASYDTWVRLSETVIPELEQE
EQECESQRDQLLEKLETQDGKVSEMTESKRDVEGLAKTVSTIARYDVEIKTIRSQIQELS
TKQQDSSTARTLEDIQEEIASNNEKSRELKKTLAKVTNEKEMTRSEINKLELEFRDMKSN
LDNVKFQLEKKADLTVRMEEFKKLNTQQRDAIEKADRDIEGLTPELLQAQARYDDISQRA
DKRERDLQHEIGRLSDNIHQLDLANDDINSYNQRGGPGQLERSKKELQEIEAEISKLEAD
QSEITREINKISTQLKDSENTKRQYSDNLTYRQATRSLNTVVEEVEQLEAQNAEVDRGRF
KQESERWTREHNSLAAKQASKMGEMKSKDDQLMQLLADWNTDYKDASSKYKECHIKVETT
KAAVEDLARYGGALDKAIMQYHGLKMAEINAIAGELWQKTYRGTDVDTILIRSDNENAKG
NRSYNYRVCMVKSGAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLD
RDNIRSLAESLHDIIRTRQQQANFQLIVITHDEEFLRHMKCGDFSDYYYRVSRNERQKSI
IERQSIAEVM
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggttgccacgcgcagcctacaacttacggtcaaaaaaaccactcgacagcagaagacc
ctagaaggccagctgcttatggtcaagaacggcgagcgcacggctatttcatcgcgagtg
gctgagctggaccaaatcatgccgcagtatttgggtgtgtcaaaggccgtgctggattcg
gtcattttctgccaccaggacgaaagtctgtggccaatgagtgaaccgtctgtactgaaa
aagagatttgacgaaatttttgaggctttgaagtacaccaaagccattgataatatcaaa
gcgctgcgaaagaagcagaatgaggagcttggcaaatacaagatcatggagcaacacgcg
aaagaagacaaagacaaagccgaccgtgctgaaaaacgatctgtcaagcttcaagatgaa
atcgaggccttgcgcgaagagacccagcggatgtcgcaagagatgcgacgcgtcgcggag
cttgctgataaggcttggacgcaatcagaaagtttcgcccaggtcctcggggctctcgag
ggcaagcgcatcgaagccaaaagcatccaaactaccattgacaaccttaaaagacatttg
attgagcttgatgactccgacgaatggcttgaatccaccctggagcaattcgaaacgaag
caggtccaatatcagcaacaagaagagtcacaaaaggaaagctatatggagatcaaggac
cagatcgagcagactaggcaccgccttggcctaaaacaagccgagaatggaaagtttgag
aacgataaggccaatttcgagcgccagtcccaaaggcgccaaaacatgatcaacgagatt
gctcgcgccaacaacattcgtggcctcggcgagaagatagatcaatctgaaattgacacc
ttcatgcaaaagatcaaacgccttttaagagaacagaaccagtccttggatcgcgtgaag
cgtgaagcccagagagagctccgtgaggtccaggaaacgcttaatgagattgggcaaagg
aagtccgcacttcaagagaccaagaacgcggcgaagcgacagattgccgcgaatgaaaac
gaggcaacaacctatcaaaaaaagctcaatgaaatcgaagttgatgaaggcttccaagct
gcgcttgagtcaaaggttgaggatattacgtcaaaccttgagcacgcgaaagatcgagcc
aaaactgcgtcctgggatcaagatattcaggatgctaatgcggaaatccgtcgcctggag
gatgaaaactcacgattgaactccgagctcattgattcaaccaagaaagctggagaattg
gctcgcttagatcacctcaagaaagaatcgaaggaccgtgaacgcagtctacaaacgatg
aaaggagcttatagcgatcgccttgagaaggccattggctcagactggaagcctgaaaca
ctggagcgaggcttccagcaagctctcgatattgaatcaaagcaagtggccgatgtagag
cgagagcgcgacggcgtgagtcgagagttggagcacgtagaattcaagcttaagacagcc
aagaagaacctcaagcaacagcaaaaggaacttgatgaatgcgtgaaggaaatccacaac
gcagtcgatgcagagccttccgagtaccccgaaattgtgaaggaacgccaggcacaatat
gatctcgctcgcaaagacgctgatcaatatgccggaatgggagagtatcttaccaaatgt
cttgatgctgctaagcgcacaaagttgtgccgaacatgtcaaagatcgttcaagaatgag
gcggaacttcagaccttcacaaagaagctggatgccctagtcaagaaggctggccttgat
gccgaagacgagaccctgaagagcctcgaagaagatctcgaaaccgctcgcgccgctagt
gcatcctacgatacttgggtccgtttgtcggagactgtcattccagagctggaacaagaa
gagcaagaatgtgaatctcagcgtgaccagcttctggagaagttagaaacccaggatgga
aaggtcagcgagatgacagaaagcaaacgtgatgtcgaaggtcttgctaagacagtgagc
actattgcgcgttacgatgtcgagattaagacgatcagatcgcaaatccaagagctttct
acaaagcagcaagactcttcaactgctcgtaccctggaagatatccaagaggaaatcgcc
tccaacaatgaaaagtcacgggagttgaaaaagactttagcgaaagtgacaaatgagaaa
gaaatgacgcggtcagagatcaacaagctcgagcttgagttcagagatatgaagagtaac
ctagacaatgtcaaattccagctggaaaagaaagcggacctgactgtccgaatggaagaa
ttcaagaagctcaatactcaacagcgggacgcaattgagaaggcagatcgagatatcgaa
ggtctcacgccagaattgcttcaagcccaagcccgttatgatgatatcagccagcgagcc
gacaagcgtgagcgagatctgcagcacgagattggtcggttatctgataacatccatcaa
cttgaccttgccaacgatgacataaactcatacaatcaacggggaggcccgggccagctt
gaacgaagcaagaaagagcttcaagaaattgaagctgaaattagcaaactcgaagccgat
caaagcgagatcacaagggagatcaacaaaatctcgacccaactcaaggacagtgaaaac
acaaagcggcagtattccgacaacttgacatatcgccaagccactcgatctctcaacaca
gttgttgaagaagttgagcaattagaagcccagaatgccgaagtggaccgaggtcgcttt
aagcaagagtcagaacgctggactcgtgaacataattcccttgctgctaaacaggcgagc
aagatgggcgaaatgaagtccaaggacgaccagttgatgcagctgctggcagactggaac
acagattataaggatgcatcttcgaaatacaaggaatgccatatcaaggtcgagaccact
aaagccgccgtcgaagacttggctcgatacggtggcgctcttgacaaggcaatcatgcaa
tatcacggcctaaagatggcagaaattaacgccatcgctggcgaactttggcagaagacc
tatcgtggaaccgacgtcgacacaattctcatacggtccgacaacgagaatgccaagggc
aatcgatcgtacaattaccgtgtctgcatggtcaagtcaggcgccgagatggatatgcga
ggccgatgcagtgcaggccaaaaggttctggctagtatcatcattcgtcttgcccttgcg
gagtgtttcggtgtcaactgcggtctcattgcacttgatgagcccaccacgaacctggac
cgagataacattcgctctctggcggagtcgctgcatgacattatccgcactcgtcagcag
caggccaacttccagttgattgtcatcacgcacgatgaagaatttctgcgccacatgaaa
tgtggtgatttcagtgactactactaccgtgtttcgcgcaacgagagacagaaatcaatt
attgagcggcagtcaattgctgaggtcatgtaa
DBGET
integrated database retrieval system
