KEGG   Penicillium digitatum: PDIP_47760
Entry
PDIP_47760        CDS       T04849                                 
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
pdp  Penicillium digitatum
Pathway
pdp03030  DNA replication
pdp03410  Base excision repair
pdp03420  Nucleotide excision repair
pdp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PDIP_47760
   03410 Base excision repair
    PDIP_47760
   03420 Nucleotide excision repair
    PDIP_47760
   03430 Mismatch repair
    PDIP_47760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdp03032]
    PDIP_47760
   03036 Chromosome and associated proteins [BR:pdp03036]
    PDIP_47760
   03400 DNA repair and recombination proteins [BR:pdp03400]
    PDIP_47760
DNA replication proteins [BR:pdp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    PDIP_47760
  DNA Replication Termination Factors
   ELG1-RFC complex
    PDIP_47760
Chromosome and associated proteins [BR:pdp03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    PDIP_47760
DNA repair and recombination proteins [BR:pdp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     PDIP_47760
  Check point factors
   HRAD17(Rad24)-RFC complex
    PDIP_47760
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_16 AAA_assoc_2 RCF1-5-like_lid AAA_11 AAA_24 AAA_30 AAA_19 AAA_5 DUF815 RuvB_N AAA_14 AAA_3 DEAD PhoH AAA_28 ResIII SLFN-g3_helicase DNAX_ATPase_lid AAA_7 ATPase_2 bpMoxR AAA_18 RNA_helicase AAA_25 Mg_chelatase nSTAND3 ABC_tran TniB IstB_IS21
Other DBs
NCBI-GeneID: 26233093
NCBI-ProteinID: XP_014533770
UniProt: K9FY90 A0A7T6XLZ1
LinkDB
Position
Unknown
AA seq 393 aa
MSDYEDEMDVDASKDVQFSSDNASGKKRTVADLPVEAQDNLPWVEKYRPSSLDDVSGHQD
ILATINRFVETNRLPHLLLYGPPGTGKTSTILALARRIYGTKNMRQMVLELNASDDRGID
VVREQIKTFASTKQIFNMAPQGTAGSPLAGFKLIILDEADAMTSTAQMALRRIMERYTSN
TRFCVIANYTHKLSPALLSRCTRFRFSPLKEVDIRTLVDKVIENEGVRMQPDAVDSLVTL
SKGDMRRALNVLQACFASSIPLPMRDAPKAPRPKPETVTNATIYDCIAAPHPSDIQEIMT
TILSTSDVTSCLNTVQTLKTTKGLALADILSALADQLQQLEVPAQTRITWLEGLAEIEWR
LAGGGSEAIQTGGLVGVVRNGCELMSDKGVMVA
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgtcagactacgaggatgaaatggacgtggatgcgtccaaggacgtgcaatttagctcc
gacaatgccagtggaaaaaagagaaccgtcgccgatctgccagtcgaagctcaggacaat
ttgccatgggttgagaaataccgaccgagcagcctggatgatgtctctggccatcaagac
attctcgcaactatcaaccggttcgtggagacaaatcggcttccccatctcctcctctat
ggacctccaggaactggaaagacctccactatcctagcccttgcacggcggatctacggt
accaaaaacatgcgacagatggtgttggagctgaatgcaagtgatgatcgtggtattgat
gttgttagagaacaaatcaagacctttgcaagcaccaaacagatcttcaacatggccccc
caaggcactgctggctcccctttggcaggattcaagcttatcattctagacgaagccgat
gcgatgacttccaccgcacaaatggccctccgccgtatcatggagcgctacacatccaat
acccgattctgcgtcattgccaactacacacataagctgtcaccagcactcctgtcccgg
tgtactcgattccggtttagtcccttgaaggaagttgacattcggaccttggtcgacaaa
gtgatagagaacgagggggtcaggatgcagcccgatgcggttgatagtttagtgaccctg
agcaaaggtgacatgcgacgagccctaaacgtgctccaggcatgctttgccagcagtatc
ccgctgccaatgagagacgctcctaaagcccctcgtcccaagcccgagactgtcaccaat
gcgacaatctacgactgcattgccgccccacacccgtccgatattcaagaaattatgacc
accatcctctccaccagcgatgtcacttcctgtctgaacacagtgcaaactctcaagaca
accaagggtctagctttggccgacattctctccgcactagcagaccaactccaacagctt
gaagtccccgctcaaactcgtatcacgtggctcgaggggctggccgagattgaatggcga
cttgctgggggcggttcggaagctattcagactggagggctggtcggcgtggtgcgaaat
ggatgtgagttaatgagtgacaagggtgtcatggtggcataa

DBGET integrated database retrieval system