Penicillium digitatum: PDIP_47900
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Entry
PDIP_47900 CDS
T04849
Name
(RefSeq) Cleavage and polyadenylation specific factor 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
pdp
Penicillium digitatum
Pathway
pdp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PDIP_47900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_47900
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
PDIP_47900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
26233107
NCBI-ProteinID:
XP_014533784
UniProt:
K9GJQ9
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MATTTQDVPVSGLPPTVPKDFTAQQPETVRLYPLSNYTFGTKETQPEEDPSVLARLKRLE
EHYGLHGMRRTCEGILVCHEHNHPHVLMLQIANAFFKLQVLYCLYAFIHNPLLIVFRPGD
YLHHEDDEIEGFKKRLNERLAPVGSQFSGEGVNDDWEISDTLAQWWRPNFETFMYPFLPG
HVTRPKECKKLYFIRLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQLSAIPHLLSRYN
FEMVDENDNIVAVTPGTPLPPGYTIPPRVLVNGDGADGDDGQDTGMTGVEEGMKIESHQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggctactactacacaggatgtccctgtcagtggacttccgcccaccgtccctaaggac
tttaccgcgcagcagccggagactgtccgcctgtaccccttgtcgaactataccttcggc
accaaggaaacacaacccgaagaggatccttcggttctagcacggctgaagcgcctcgag
gaacattatggcctccatgggatgcgacggacttgtgagggaatcctggtgtgccacgag
cacaatcacccccatgtgctgatgctgcagattgccaatgcattctttaaactgcaagtt
ctctattgtttatacgcctttattcacaatccactgctaatagtcttcaggccaggcgac
tatcttcaccacgaggatgacgagattgaaggtttcaagaaacgactgaatgagcgtctc
gcacctgtgggatctcagttctccggtgaaggtgtgaacgatgactgggaaatcagcgac
acacttgcgcaatggtggcgacccaacttcgagacttttatgtatccgttccttcctgga
catgtcactcgccccaaggaatgcaagaagttgtactttattcgcctccccaagaagaag
gttctctccgttccgaaaaacatgaaacttctcgctgtgccgctgttcgagttgtatgac
aacactgctcgctatggccctcaactctctgccattccacatctcctatcacgatataac
ttcgagatggtcgatgagaacgacaacattgttgctgtgactcctggcaccccgttgcct
cccggttacaccatccctccccgagtccttgttaacggtgacggtgcagacggggacgat
ggacaggacaccggtatgactggtgttgaagagggaatgaagattgaatcccaccagtag
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