Penicillium digitatum: PDIP_50340
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Entry
PDIP_50340 CDS
T04849
Name
(RefSeq) RNA binding protein, putative
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pdp
Penicillium digitatum
Pathway
pdp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_50340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdp03041
]
PDIP_50340
Spliceosome [BR:
pdp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PDIP_50340
Complex C
U4/U6.U5 tri-SnRNP related factors
PDIP_50340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
26233351
NCBI-ProteinID:
XP_014534028
UniProt:
K9FTW7
A0A7T6XLQ6
LinkDB
All DBs
Position
Unknown
AA seq
217 aa
AA seq
DB search
MAAHRADASSFLDNRGYKGPLIRGVNPATLFEKAVRDRITDSYYWKEQCFGLNAATLCDR
AVELTSIGGTYGVSEKPTPFLCLAFKLLQLGPDRDVILELLNYTDPGSGDEAENPDDALV
KDRGDFKYLRALAAFYVRLTFDPVDVYKTLEPLLLDYRKLKRRVRDNFTLTYMDQFVDDL
LTKDRVCGTSLWKLPPRSQLEDLDLLDERISPCEPED
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcatcgtgccgatgccagctccttcctcgataaccgtggctacaagggccct
ctcatccgtggcgtcaaccccgcgacgctctttgagaaagctgtgcgcgaccgcatcacc
gactcatactactggaaggaacagtgcttcggtttgaacgcagcgactctatgtgatcgt
gcagtcgaattgacctctatcggtgggacatacggggtatctgagaaacccacccccttc
ctttgcctcgcattcaagctccttcagctcgggcctgaccgagacgtcattctcgagcta
ctcaattacaccgaccccggcagtggtgacgaggcagaaaatccagatgatgctctcgtc
aaggatcgaggcgactttaaatacctccgcgctctcgcggcattctacgtgcgactgact
ttcgacccggtcgacgtctacaaaaccctggagccactacttcttgattaccggaaactg
aagcgacgggtgcgcgacaatttcacgcttacctacatggatcagtttgtcgatgatctt
ctcacaaaagaccgtgtctgtggtaccagtctctggaagctgccgccgcgatcacaactg
gaggacttggatttgctggatgagcgaatcagtccttgtgagccagaagactga
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