KEGG   Penicillium digitatum: PDIP_50340
Entry
PDIP_50340        CDS       T04849                                 
Name
(RefSeq) RNA binding protein, putative
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
pdp  Penicillium digitatum
Pathway
pdp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PDIP_50340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pdp03041]
    PDIP_50340
Spliceosome [BR:pdp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    PDIP_50340
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    PDIP_50340
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 26233351
NCBI-ProteinID: XP_014534028
UniProt: K9FTW7 A0A7T6XLQ6
LinkDB
Position
Unknown
AA seq 217 aa
MAAHRADASSFLDNRGYKGPLIRGVNPATLFEKAVRDRITDSYYWKEQCFGLNAATLCDR
AVELTSIGGTYGVSEKPTPFLCLAFKLLQLGPDRDVILELLNYTDPGSGDEAENPDDALV
KDRGDFKYLRALAAFYVRLTFDPVDVYKTLEPLLLDYRKLKRRVRDNFTLTYMDQFVDDL
LTKDRVCGTSLWKLPPRSQLEDLDLLDERISPCEPED
NT seq 654 nt   +upstreamnt  +downstreamnt
atggcagctcatcgtgccgatgccagctccttcctcgataaccgtggctacaagggccct
ctcatccgtggcgtcaaccccgcgacgctctttgagaaagctgtgcgcgaccgcatcacc
gactcatactactggaaggaacagtgcttcggtttgaacgcagcgactctatgtgatcgt
gcagtcgaattgacctctatcggtgggacatacggggtatctgagaaacccacccccttc
ctttgcctcgcattcaagctccttcagctcgggcctgaccgagacgtcattctcgagcta
ctcaattacaccgaccccggcagtggtgacgaggcagaaaatccagatgatgctctcgtc
aaggatcgaggcgactttaaatacctccgcgctctcgcggcattctacgtgcgactgact
ttcgacccggtcgacgtctacaaaaccctggagccactacttcttgattaccggaaactg
aagcgacgggtgcgcgacaatttcacgcttacctacatggatcagtttgtcgatgatctt
ctcacaaaagaccgtgtctgtggtaccagtctctggaagctgccgccgcgatcacaactg
gaggacttggatttgctggatgagcgaatcagtccttgtgagccagaagactga

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