Penicillium digitatum: PDIP_51970
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Entry
PDIP_51970 CDS
T04849
Name
(RefSeq) RNA binding protein, putative
KO
K12881
THO complex subunit 4
Organism
pdp
Penicillium digitatum
Pathway
pdp03013
Nucleocytoplasmic transport
pdp03015
mRNA surveillance pathway
pdp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_51970
09122 Translation
03013 Nucleocytoplasmic transport
PDIP_51970
03015 mRNA surveillance pathway
PDIP_51970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_51970
03041 Spliceosome [BR:
pdp03041
]
PDIP_51970
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PDIP_51970
TREX complex
PDIP_51970
Spliceosome [BR:
pdp03041
]
Complex C
Other components
EJC/TREX
PDIP_51970
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PDIP_51970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
26233514
NCBI-ProteinID:
XP_014534191
UniProt:
K9FSF9
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MDRSLDEIIAEDTQNTGRPSGGSGGPRRHNNPGRRHERDGVRKPYTSDRVDLNLDWVHDK
FDDDRSRPSRGGRRGRDGPDIDRSSTLTKVRVENLHYDITETDLEVGFNCPILNTHARAP
LTNFFAEQDLFGRIGPVSELTVSYDRAGRSEGVAYITYARLKDAHTSIQEYDGANAKGQP
IRLSLIPGRRERNPLDSAQRPRHSLLDRVERPRDDRSMSPENNADGRRRRGGGRAHRSDV
TKPAPDNIDRYVPGQRSHQRSPNRRGGGRRGGRDNRSQQTDGSNRRSNARPRKTQEELDQ
EMEDYWGGANNAGGEATAPAQDAAPQQTAPAPSAPAADDDIDMIE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcagcttggacgagattatcgctgaagacacgcagaacactggtcgcccctca
ggtggcagtggtggtcctcgtcgtcacaacaaccccggtcgtcgccacgagcgcgatggc
gtcagaaagccatacacttcagaccgtgtcgatctcaacctcgactgggtgcacgacaaa
tttgacgacgaccgatcccgcccgtcccgtggaggccgcagaggccgcgacggacctgat
atcgatcgctctagcacactgaccaaggttcgcgtggaaaacctccactatgacattacc
gaaaccgacctcgaagtaggttttaactgccccatcctcaacacccacgcaagagcacct
ctaaccaacttcttcgctgaacaggatctcttcggccggattggacctgtttctgagctt
accgtctcttatgaccgcgctggacgctccgagggagttgcttacatcacatacgcccgc
ctgaaggacgcacacacttcaattcaggagtatgacggagccaacgccaagggccagccc
atccgtctttctctcatcccgggccgccgtgaacgtaaccccctagactccgcacagcgt
cctagacacagtcttctggaccgcgtcgagcgtccccgcgacgaccgcagcatgagcccc
gagaacaatgctgatggccgacgccgccgtggtggcggccgtgctcatcgcagcgacgtc
actaagcccgccccagacaacatcgaccgttatgtccccgggcaacgctcccatcagcgc
tcccctaaccgccgcggcggaggcagacgtggtggacgtgacaaccgctcccaacagact
gatggatccaaccgccgatccaatgcccgtccgcgcaagactcaggaggagttggaccaa
gagatggaagattactggggtggtgcgaacaacgccggcggtgaagcgactgcacccgct
caggacgcagccccccagcagactgctccggcccccagcgcacccgctgccgacgacgat
atcgatatgattgagtaa
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