Penicillium digitatum: PDIP_54390
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Entry
PDIP_54390 CDS
T04849
Name
(RefSeq) RSC complex subunit (RSC8), putative
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pdp
Penicillium digitatum
Pathway
pdp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PDIP_54390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdp03021
]
PDIP_54390
03036 Chromosome and associated proteins [BR:
pdp03036
]
PDIP_54390
Transcription machinery [BR:
pdp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
PDIP_54390
Chromosome and associated proteins [BR:
pdp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
PDIP_54390
PBAF complex
PDIP_54390
GBAF(ncBAF) complex
PDIP_54390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
AAA_9
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
26233755
NCBI-ProteinID:
XP_014534432
UniProt:
K9FS00
A0A7T6XKV7
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MDDIPINPAVAHDNAQSVTGLDGAADATREASGAQSHQASPVKNIENTPGSDNPMDAPVS
PKPRNGGVEPEDEEMGGTETDAKPDAEGLEDAVGESHTQVEGADGLEDAVGEEQPAPSKS
SLEAAAREQLVTQTHAIILPSYATWFDMNTINPIEKKALAEFFNGRNRSKTPATYKDYRD
FMINTYRLNPIEYLTVTACRRNLAGDVCAIMRVHSFLEQWGLINYQVDPQTRPSNIGPPF
TGHFRVIADTPRGLQPFQPGPNHSVTSGKIHPATQRAISSISATKEDLNLELRRTIYDEK
GKDITSAEEKEKQTNGEVTNGLDMAQESKKKAHCFSCGIDCTKLRFHYAKSASTSANATT
PDTKYDLCPNCFLQGRMPSSHSASDFVKLEEKSYSHLIDKDTPWSDSELILLLEGLENFD
ENWEQIASHVGTRSREECVMKFLQLEIEDKYVEDVPELQSGSGRDPISQSENPVLSVVAF
LAQMAEPAVAAAAAGRSVEEIRKELRSQLERGQGKGKDAIKSEDSMDVDPTREAEQQVSA
KPKETLGTIALAASAARAGALASHEEREMTRLVSAAVNVTLQKFEIKLQQFNEMEEIIEA
ERRELEQARQQLFLDRMTFKKRVKEAQDALQTVSLQGPNEHTNQMLADAATTGIGNHYSF
QPVGGDLRAGTQPLSAQAGVDYKTLDL
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggatgacattcccatcaacccggctgtagcccacgacaatgcccagtctgtgactggc
ctagatggtgcagctgatgcaactcgcgaagcctcaggagcgcaatcgcaccaagcttcg
cccgtgaagaatattgagaatacacctggatctgacaacccgatggacgcccccgtatcc
cccaaacctcggaacggcggagttgaaccggaagacgaagagatgggtggtactgagact
gatgccaagccagacgccgagggcctggaggatgctgtgggcgagtcgcacacgcaagtg
gagggagcggatgggcttgaggacgctgtgggtgaagaacaacccgcgccatccaagtca
tctctggaagccgccgcgcgcgaacagctcgtcacccaaacacacgccatcatcctcccc
agctatgcaacatggtttgatatgaataccattaacccaatcgagaagaaagctctcgcc
gagttcttcaatggccgcaaccgcagcaagacgcctgctacatacaaagactaccgagac
ttcatgatcaatacctatcgattgaaccccatcgagtatttgaccgttactgcttgccgt
cgcaatcttgcgggtgatgtctgtgctataatgcgtgtccactcattccttgaacagtgg
ggtttgatcaactaccaggttgaccctcagacacggccgtccaatattggaccgccattc
accggtcatttcagagttatcgcagatactccacggggtctgcagccattccagcctgga
ccaaatcacagcgttacgtccggcaagattcatccagccacgcagcgtgccatctcttcc
atctctgcaactaaagaagacctcaacctagaactacgccgcaccatttacgacgaaaaa
ggcaaggatatcacctccgcggaagagaaagagaaacagaccaatggcgaagtaacaaac
ggcttggatatggctcaagaatccaagaaaaaggcacactgcttctcttgtggtattgat
tgcaccaaacttcgatttcactacgccaaatcggcttcaacatcagccaacgctactaca
ccagacaccaagtatgatctgtgtcccaactgcttccttcaagggcgtatgccttctagc
cacagtgcctcggacttcgttaagctagaggagaagagctactctcacttgattgacaaa
gacactccgtggtcggactcggaactgattttgttgttggaaggcctggagaacttcgat
gaaaactgggaacaaattgcgagccacgttggcacacgatctcgggaagagtgtgtcatg
aagttcttacagctagagattgaggacaaatacgttgaagatgtccctgagctgcagtct
ggcagcggacgtgaccccatcagccagtccgaaaaccccgttctttctgtagtggcattc
ctggcccagatggcggagcccgcagtggctgctgccgccgccggtcggtctgtcgaggag
atccgcaaggaactccggagccagctggagaggggacaaggcaaaggcaaggatgcaatc
aagtccgaggattctatggacgtggatcccacacgtgaggctgaacagcaagtttccgcg
aagcccaaggagacccttggcaccatcgctctggctgcatctgccgcacgtgccggagct
cttgcctcgcacgaggagcgcgaaatgacccgcctggtctctgcagcagtcaacgtcacc
ttgcagaagttcgagattaagctgcagcaattcaacgagatggaagagattatcgaggct
gagcgtagggaattggagcaggcgcgccaacaactcttcttggaccggatgacgttcaag
aagcgtgttaaagaggcccaggatgcacttcagactgtcagcctgcagggccccaatgag
cacacaaaccaaatgctggctgatgctgctaccacaggcattgggaaccattacagcttc
cagcctgttggcggagatctgcgggctggaactcagcctctgagcgcccaagctggtgtc
gactacaagacccttgacctgtag
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