Penicillium digitatum: PDIP_55940 Help Entry PDIP_55940        CDS       T04849                                  Name (RefSeq) DNA-directed RNA polymerase   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism pdp  Penicillium digitatum Pathway pdp03020   RNA polymerase pdp03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pdp00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     PDIP_55940   09124 Replication and repair    03420 Nucleotide excision repair     PDIP_55940  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pdp03021]     PDIP_55940    03400 DNA repair and recombination proteins [BR:pdp03400]     PDIP_55940 Enzymes [BR:pdp01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      PDIP_55940 Transcription machinery [BR:pdp03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      PDIP_55940 DNA repair and recombination proteins [BR:pdp03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       PDIP_55940 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 MRNIP Motif Other DBs NCBI-GeneID:  26233910 NCBI-ProteinID:  XP_014532820 UniProt:  K9FQU8 A0A7T7BL39 LinkDB All DBs Position Unknown AA seq 1255 aa AA seqDB search MADYDETYEEDFYDEADEGITSEDCWTVITSFFDSKGLVSQQLDSFDEFISSTMQELVEE QGQVVLDQTLPPSEDEIEPIVVRRYELKFGTVMLSRPSVTEGDGATTIMLPQEARLRNLT YASPLYLGVTKKIMEGRERMGKPNDDDDNDGETDPKTQGTYLEWETKQLPQEQMKEETVF IGKMPIMLKSKYCILKDLNDASLYAWNECPYDSGGYFVINGSEKVLIAQERSAGNIVQVF KKAPPSPTPYIAEIRSAVEKGSRMLSSLTLKLFAKGDSAKGGFGPTIRSTLPYVKADIPI VVVFRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQS NLNHDRRVRYARDIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHF GKKRLDLAGPLLASLFRTLFTRVTKDLQRYVQRCVETNREIYLNIGIKASTLTGGLKYAL ATGNWGEQKKAASAKAGVSQVLSRYTFSSSLSHLRRTNTPIGRDGKIAKPRQLHNTHWGL VCPAETPEGQACGLVKNLALMCYITVGTPAEPIVDFMIQRNMEVLEEFEPQVTPNATKVF VNGVWVGIHRDPSHLVTTMQNLRRRNMISHEVSLIRDIREREFKIFTDTGRVCRPLFVID NDPKSENSGGLVLNKEHIRKLEADKDLPPDLGPEERREQYFGWDGLVRSGAVEYVDAEEE ETIMIVMTPEDLEISRQLQAGYALPEDETSDPNKRVRSILSQRAHTWTHCEIHPSMILGV CASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNFSQRMETMANILYYPQKPLATTRSMEF LRFRELPAGQNAIVAIATYSGYNQEDSVIMNQSSIDRGLFRSLFYRTYADTEKMVGLQVV ERFEKPMRIDTLGMRKGTYDKLDEDGIVAPGVRVSGEDIIIGKTAPLAADAEELGQRTKA HTKIDVSTPLRSTENGIVDQVLVSTGNDDLKFVKVRMRTTKIPQIGDKFASRHGQKGTIG ITYRQEDMPFTREGVVPDLIINPHAIPSRMTIAHLIECQLSKVSALRGFEGDATPFTDVT VDSVSRLLREHGYQSRGFEVMFNGHTGRKMVAQVFLGPTYYQRLRHMVDDKIHARARGPT QILTRQPVEGRARDGGLRFGEMERDCMIAHGASAFLKERLFDVSDPFRVHICDDCGLMTP VAKLKKGLFECRLCNNKHRISQVHIPYAAKLLFQELASMNIAARMFTDRSGVSVR NT seq 3768 nt NT seq  +upstreamnt  +downstreamnt atggccgactacgacgagacatatgaggaggacttttacgatgaggcggatgagggcatc acctccgaggattgctggacggtgatcacgtccttctttgactcgaagggtcttgtctct cagcagttggactcattcgatgaattcatctcctcgaccatgcaggagcttgtggaggag caaggccaggtggttctcgaccagactctacccccctccgaagacgaaatcgagccgatt gttgtgcgccgttacgagctcaaatttggcactgtcatgctttcgcgcccatctgttact gaaggcgatggtgcaaccacgatcatgttgccccaagaagctcgtttacgaaaccttact tacgcctccccgctctacctcggtgtcacaaagaagattatggaaggtcgtgagaggatg ggcaagcccaacgacgatgatgataatgatggggagactgatccgaaaacacaaggcacc tacctcgagtgggaaacgaagcagctgccccaggagcagatgaaggaggaaacagtcttc attggaaagatgccaattatgctgaagtctaaatactgtatccttaaggatctgaacgat gcgtcactttacgcttggaacgagtgcccctacgactctggcggttatttcgtcatcaac ggcagtgaaaaggttttaatcgcacaggagcgcagtgcaggcaacatcgtccaggtcttc aagaaggcaccccccagcccgacaccctacattgccgaaattcgaagtgcggtcgagaag ggctcgcgtatgctttcgtcgcttactttgaaacttttcgccaagggcgacagcgctaaa ggagggttcggcccgactattcgttctactcttccctacgtcaaggccgatattccaatc gtcgtcgttttccgtgcgctgggcgtcgtttccgatgaagatatcctcaaccacatttgc tatgaccgcaacgatacccccatgttggagatgttgaagccgtgtattgaggagggcttt gtcattcaggaccgtgaagttgccctagatttcattgccaagcgtggatcgtcacagtcg aacctgaaccacgatcgtcgtgtgcgctacgcccgggatattatgcagaaggaattgttg cctcacatttcgcagagcgagggcagcgaaacccgcaaagctttcttccttggatatatg gtgcaccgacttcttcagtgtgctctgggtcgccgcgatgtcgatgaccgagatcacttc ggaaagaagcgactcgatttggctggtccgctcttggccagtcttttccggactcttttc acccgagtcacaaaggatctccagcgttacgtgcagcgatgcgttgagaccaatcgcgaa atttatctcaacattggtatcaaggctagcactttgaccggtggattgaagtatgccctt gctactggtaactggggcgagcagaagaaggcagcttccgccaaggctggagtgtcccag gtgctgagtcgttacacattctcttcctccttgtctcacttgcgccgaacgaacacccca attggcagagatggaaaaattgccaaacctcgccaactccataatactcactggggcctg gtctgcccggctgagacacccgaaggtcaagcttgtggtctcgtcaagaacctggcattg atgtgctacatcactgttggtacacctgccgaacccatcgtggacttcatgattcagcgc aacatggaagttctcgaggagtttgaaccccaagtgacgcccaacgcaacaaaggtgttt gttaacggtgtctgggtgggtattcaccgggacccttcccatcttgttaccacgatgcaa aatctgcgtcgacgaaacatgatctcccacgaagtcagtttgattcgtgacattcgtgaa cgagagttcaaaattttcaccgatactggacgtgtctgccggccactgttcgttatcgac aacgatcccaagagtgagaactcgggcggattggtcctcaacaaagaacacattcggaag ctcgaggccgacaaagacttgccaccagacttgggcccagaagaacgtcgtgaacaatac ttcggatgggacggtctggtgcgttctggagcagttgagtatgtcgatgccgaagaagag gaaaccatcatgattgtcatgactcccgaggatctcgaaatctccagacagcttcaggcc ggttacgctctgcccgaagacgaaaccagtgaccccaacaagcgtgttcggtcaattctc agccagcgcgcccacacctggacgcattgcgaaatccatcctagtatgatcttgggtgtc tgtgctagtattattcctttcccggatcacaaccagtcgccacgtaacacctatcagtct gccatgggcaaacaagccatgggtgttttcttgacgaacttctcgcagcgtatggagact atggctaatattctctactacccacaaaagcctttggccactactcggtccatggagttc ctgcgtttccgagagctgcccgccggtcagaatgctattgtcgctattgcaacttattct ggttataaccaggaagattccgttatcatgaaccagagcagtatcgatcgtggtctgttc cgcagtctcttctaccgcacctatgcggataccgaaaagatggtgggactgcaagttgtt gagagattcgaaaagcctatgcgcattgacacccttggtatgcgtaagggtacttatgat aaattggacgaggacggcatcgttgctcccggtgtgcgtgtctctggagaagacattatt atcggcaagaccgctcccctggctgctgatgcggaggagcttggccagcgcaccaaggca cacacaaagattgacgtatcaacgcctctgcgcagcaccgagaacggtatcgttgatcag gttctcgtctccactggtaatgacgatctgaagttcgtcaaggttcgcatgcgtaccacc aagattccccagattggtgacaagtttgcctctcgtcacggtcagaagggtaccattggt atcacctaccgacaggaggatatgcccttcactcgggaaggtgtcgttcccgatctgatc attaacccccacgccattccgtcccgtatgaccattgcccatttgatcgaatgccaactc agcaaggtttccgctcttcgtggattcgagggtgatgctactcccttcaccgatgtcact gtcgactcggtctcccgtctgctgcgtgagcacggctaccagtcgcgtggcttcgaggtc atgttcaatggccacactggtcgcaagatggtggcgcaggtgttcctgggtcctacctac taccagcgtctgcgccacatggtggacgacaagatccacgcccgtgctcgtggtcctact cagattttgacccgccagcctgtggagggtcgtgcccgtgatggtggtcttcgtttcgga gagatggagcgtgattgtatgatcgcccacggtgccagtgctttcctgaaggagcgtctc tttgacgtttctgatccgttccgtgttcatatttgcgacgattgcggcctgatgacacct gttgcgaaattgaagaaaggtctatttgagtgccgtctttgcaacaacaagcaccgcatc tcgcaagtccatatcccctacgctgccaagctgttgttccaagagctggcctccatgaac attgccgctcggatgttcaccgatcgctctggggtgtcggtgcgttga

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