KEGG   Penicillium digitatum: PDIP_56450
Entry
PDIP_56450        CDS       T04849                                 
Name
(RefSeq) U5 snRNP complex subunit, putative
  KO
K12857  Prp8 binding protein
Organism
pdp  Penicillium digitatum
Pathway
pdp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PDIP_56450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pdp03041]
    PDIP_56450
Spliceosome [BR:pdp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    PDIP_56450
 Complex C
   U5 SnRNP specific factors
    PDIP_56450
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 26233961
NCBI-ProteinID: XP_014532871
UniProt: K9FP53 A0A7T7BL54
LinkDB
Position
Unknown
AA seq 416 aa
MVAFICWTQPAHRRHQVGLSFFPQRLALNFCYHYFRPKTRLVTNQFFYFSKLTEALAVTM
SGEKRPAPEGFGTSHQLVVKRNKAAENAGTELVKSSSQNGALIQSVPRTSGLDAPIMELT
GHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGQLTGHRGAVLDLQWSRDSRA
LFSASADMTLGSWDVETGERVRRHVGHEEIINCLDISKRGQELLVSGSDDGSIGIWDPRQ
KDALDYLQTELPITAVALSEAGNEIYSGGIDNTIHAWDIRKKAIVYSMAGHTDTITSLQI
SPDSQTLLSNSHDSTVRTWDIRPFAPTNRQVKTYDGAPVGLEKNLIRASWDLKGEKIAAG
SGDRSVVVWEAKTGKLLYKLPGHKGTVNDVRFSPNDEPIIVSCSSDRNLVLGELGK
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggtcgctttcatctgctggacacagcccgctcaccgccgacaccaagtgggattatcg
ttcttcccgcagcgtctcgccctgaacttttgctatcactactttcgcccgaagacgcga
ttggtcaccaatcaattcttttatttctccaaactcaccgaggcgcttgctgtgacaatg
tctggtgaaaagcgccctgctccagaggggtttgggacctcgcaccagctcgtggtcaag
cgaaacaaggccgccgaaaatgcaggaaccgaactcgtaaagagctcttcccaaaatgga
gctctcattcaatctgttcctcgcacaagtggtttagatgctcctatcatggagctcaca
ggtcactctggtgaagtcttcgcagttcgattcgaccctaccgcacaacacatcgcatct
ggatccatggatcgttccatcttgctgtggaacacatacggacaatgcgaaaattacggc
caattgacaggtcaccggggagctgtgttggatcttcagtggtcacgcgattcgcgggca
ctgttctcggcatccgcagatatgaccctcgggagctgggacgtcgagaccggagaacga
gtacgccgtcacgtgggccatgaggaaatcatcaactgtcttgatatcagcaaaagagga
caagagcttctagtcagtggtagtgatgatgggtccatcggcatctgggatcctcggcag
aaggatgctctggactaccttcaaactgaactcccaattaccgcagtggcattgtccgaa
gcaggcaatgagatttacagtggaggtattgacaataccatccacgcctgggatattcga
aagaaggccatagtctactcgatggctgggcacacagataccatcacatcgctacaaatc
tcgccagactcacagacattgctgtcgaactctcatgactctactgtccgtacatgggac
attcgtcctttcgcccctaccaaccgacaagtgaagacctacgatggcgctcctgtcgga
ctggagaagaacctcatccgtgccagctgggacctcaagggcgagaaaattgctgctggc
agtggtgatcgaagcgtggttgtttgggaggctaagactggtaaattgctgtacaaactt
cctggtcacaagggcactgtcaatgacgtgcgcttctcccccaatgatgaaccgatcatc
gtttcctgctcctccgatcgcaacctggtacttggagagctgggcaaataa

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