Penicillium digitatum: PDIP_56700
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Entry
PDIP_56700 CDS
T04849
Name
(RefSeq) WD repeat protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
pdp
Penicillium digitatum
Pathway
pdp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PDIP_56700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_56700
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PDIP_56700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
WD40_Prp19
EIF3I
WDR55
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
26233986
NCBI-ProteinID:
XP_014532896
UniProt:
K9GDA1
A0A7T6XMG9
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MESGQQIIGFSICPEDQESLYIFTSSGSTSKWNWSSGKRIARWETTCTTFSTSLASVGKE
GCTAAVSFSIISQKDGKRHISINTLGDKKIQGTTTALETSQKINSIKVTPDGRVIIASDG
KHLFVGATTSAELETLETAQYAWREVTLPVNATCFDIQIQGSESIDLAVGESGGSILIYQ
NVLNGLLDKDFSDKRSSPRKLHWHRGSVNTVRWSKDGNYIISGGQESVMVLWQLDTGRKQ
FLPHLSSPICNIVVSTSGSSYVVKLADNSVMILSTRELQPLTTITGLQLCPDMSGSVESS
KGSVVAKLHPQQPERLIVAVPASHQLTQNQYGSQPANAAVLQTYDIRVNTNISRQALART
NATTLSVGPEGSQIVAPDVKHLDIVHDAKWLATVDTWAPHPQDVEALDRSVNAKSTATLR
PEVFLKFWKWDASSDTWELVTRVDGPHFSKNHHSAVLGLASRPGAHEFATLGADSILRFW
CPTAKCRSGLKAKDQTDQHLNTWKCRGTVDLKGCLNSTENSPLDAACMIFSEDGSVLAVC
LPSTSAANDGLVLLIDAHNCSVHYRRTGVFLGNPCSTSFLGSHLIVASTHSVAVWDTVDD
IVKTIQSSESVDSPAGTSQLIAVNARTNSLAIVTSSSHKKRRKVRFQIKIYDVPSFEVVF
QETLHTSPVALLSDAYSGDYIVVDSAATVQRLGCLGKASQKSHNNQSRDVTGQIDNGLAT
LFNRGPERLLAQSDDVEDFSAQTKGLASVFGETPSFSLPAVGVLFRNVVQTLGS
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggagtctggccaacagatcattggattcagtatctgccccgaggaccaggaaagcctc
tacatcttcacgtcttcgggctctactagcaaatggaattggagttccggaaagcgcatc
gcacgctgggagaccacctgcacaacgttttcaacaagcctagcctctgtgggaaaagaa
ggatgcacagctgccgtttcattttccataatctcacaaaaagatggaaaacgacatatt
tcgatcaacacactgggggacaaaaagatccaaggcaccaccaccgccctagagaccagc
cagaagatcaatagtatcaaggtaactcctgacggccgagtgatcatcgccagtgatggt
aagcatctttttgtgggtgctactactagcgcagagcttgaaacccttgaaaccgcccag
tatgcctggcgcgaggtaacccttcctgtcaatgctacttgctttgacatccagatccaa
ggctcggaatccatcgatctggcggtaggagaaagcggcggttctatcctgatttaccaa
aatgtcttgaatggtctcctcgacaaggatttcagcgataaaaggtcttcgcccaggaag
ttgcattggcaccgcggctctgtgaacaccgtgcgttggtctaaagacggaaactacatt
atttcgggtggccaggagtcagtcatggttctctggcaactggacactggccggaagcaa
ttccttccccatctttcctcccctatctgcaacatcgtcgtctctaccagtggcagctca
tatgtggttaaactggccgataactcagtcatgatcttgtcgacgagagaattgcaacct
ctcactaccatcacaggattgcagttgtgcccagatatgtcaggctctgtggaatcctca
aagggatccgttgtggcgaaattgcacccgcagcaaccagagcgattgattgtggccgtc
ccagcatcccaccagcttactcaaaaccagtatggctctcagcctgcaaatgcggctgtg
cttcagacatatgatatccgcgtcaacaccaatatctcccgccaagcccttgcgcgaacc
aatgcgacaactttgagcgtcggccctgaagggtctcaaatcgtcgcacccgatgttaag
cacttggatattgtgcatgatgcaaagtggttagccacggttgatacctgggcccctcat
cctcaagatgtggaagccctagatcgctctgtgaatgctaaatccaccgccacccttcgt
ccggaggtctttttgaagttctggaagtgggacgcttcctctgatacatgggaactggtc
actcgtgttgacggtcctcatttctccaagaatcatcactcagctgtacttggtctagct
tctcggcccggtgcccacgagtttgcaacactaggtgctgactctattctccgcttctgg
tgtccaactgcgaaatgtcgaagtgggctgaaagccaaagatcaaacagatcagcatctg
aacacgtggaagtgtcgtggtactgttgaccttaagggatgtctcaattccaccgaaaat
tctcctctggatgcggcttgtatgattttctccgaagatggctcagtgctggccgtctgt
ctgccgtcgacatcggctgcaaatgacggtcttgttctgctgattgatgcacacaactgc
tctgtgcactaccgacgcaccggtgtttttcttggaaacccctgctcaacaagtttcctg
ggaagccatctgatcgtcgcttctactcactcggtagctgtctgggacacagtcgacgat
attgtcaagactatccagtcgtcagagtctgtggattcgcctgccgggacctcacagctt
attgccgtgaatgccagaacgaattcattggcaattgttacgagttcgtcacacaagaaa
cgacgtaaggtccgattccaaatcaagatctatgacgtcccatcgttcgaggtagtcttc
caggaaaccctgcatacctccccggttgcactgctctctgatgcttattctggtgattac
atcgtcgttgattctgcagcaactgtgcagcgtcttggctgtctgggcaaggcttcacag
aagagccacaacaatcagtcccgtgatgtgaccggccaaattgacaatggactggcaact
ctcttcaaccgcggaccggagaggctcctcgctcaatctgacgacgtggaggacttttct
gctcaaacaaagggactagctagtgtgtttggtgagactccatcattctccttgccagct
gttggggtccttttcaggaacgtggtccaaacactcggctcttaa
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