Penicillium digitatum: PDIP_56740
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Entry
PDIP_56740 CDS
T04849
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
pdp
Penicillium digitatum
Pathway
pdp03030
DNA replication
pdp03420
Nucleotide excision repair
pdp03430
Mismatch repair
pdp03440
Homologous recombination
pdp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PDIP_56740
03420 Nucleotide excision repair
PDIP_56740
03430 Mismatch repair
PDIP_56740
03440 Homologous recombination
PDIP_56740
03460 Fanconi anemia pathway
PDIP_56740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdp03000
]
PDIP_56740
03032 DNA replication proteins [BR:
pdp03032
]
PDIP_56740
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_56740
Transcription factors [BR:
pdp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PDIP_56740
DNA replication proteins [BR:
pdp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PDIP_56740
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PDIP_56740
MMR (mismatch excision repair)
PDIP_56740
DSBR (double strand breaks repair)
HR (homologous recombination)
PDIP_56740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
DEAD
REPA_OB_2
Helicase_C
Rep-A_N
ResIII
tRNA_anti-codon
CDC24_OB3
CMS1
Motif
Other DBs
NCBI-GeneID:
26233990
NCBI-ProteinID:
XP_014532900
UniProt:
K9GD77
A0A7T6XM96
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MASEAASQVTIGALSAIFDETKPQVREPIVQCVQIKALPAQPNQPERYRAVFSDIANYVQ
TMLATQANSVVTDGSLRKGSFVRLKSFQSNSVKGKKILIILNLEVLKELGEAEKIGEPKP
LEVKAEEEEVGQPTTISSNGFYGSKTGGAQAQPNSRAQPMSASMSTSSAHATIYPIEAIS
PYSNKWTIKARCTSKSSIKTWHNKNGEGKLFSVNLLDDSGEIRGTGFNDQCDMLYELFQE
GSVYYISSPCRVQIAKKQFTNLNNDYELTFERDTIVEKAEEQNDVPQIRFNFTTVADLQT
VEKDTTTDVIGVLKDVGETSQITSKSTGKPYDKRELTLVDNTGFSVRLTIWGASANNFSV
APESVVAFKGVKVSDFGGRSLSLLSSGSMTVDPDIGEAHRLRGWYDAQGRSENFTSHASL
SNATNSTGKTDRFKTVAQVREEQLGMSETPDYFSLKATVIYIKQDSTWCYPACLSENCNK
KVTELDPGQWRCEMCDKTHLKPEYRFIMPISVSDHTGQLWLSCFDDTGRNIMGMSADELM
QLREDDPSAFGEVFQGANCQTWSFRCRAKIDNFGDQQRVRYQVSSSQAINYSDEASRLAD
IIDSYSIEILVMGKRSHLEPTEQRPKKKSKSEKPTKASKDKQENGDEKTTSYSDAAALSE
IPQSDIDSFLTKNVIKISDSSSPDASQFRPILSFDHLPECDAGLYTQLRSFSAPTPIQSS
TWPLLFAGRDVIGIAETGSGKTLGFGLPCLKKLIDSKSSKPCQPKAVIISPTRELAMQIY
DQLVKFGDTEKTRVTCIYGGVGKDEQRRALQKAAIVVATPGRLKDLLNDGSIDLAKVTYL
VLDEADRMLDKGFEQDIKDIVKPMPVSRRQTVMFTATWPRSVRDLAASFMKTPVTVTIGG
DPSADPRANTRIKQVVEVIDGREKEGRLVQLLTKSQRGNQSPEKVLVFCLYKKEAMRIEN
LIRNKGFAVAGIHGDLNQSDRFRNLDAFKKGNATVLVATDVAARGLDIPNVKLVINVTFP
LTVEDYVHRIGRTGRAGADGLAITMFTETDKGLSGGLINVLKAAKQDVPEALLKFGTTVK
KKQHDVYGAFYKDVDMEKTATKITFDD
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgaggctgcatctcaagtcaccattggagctctaagtgccatttttgatgaa
accaaaccccaagtacgagagccgattgttcaatgcgttcagatcaaggcattgccagct
cagccgaaccaaccagaacgttatcgagctgttttcagtgatattgcaaactatgttcaa
accatgcttgctactcaagccaactccgtggtgacggatggatctctccggaaaggttct
ttcgtgcgacttaagtcatttcaatcaaactctgtcaaggggaagaaaatcctcatcatc
ttaaaccttgaagtattaaaagaactgggcgaggctgaaaaaattggtgaacccaaacca
cttgaagtcaaagccgaggaagaggaagtaggtcaaccgacaacaatatccagcaatggg
ttttacggctccaagacagggggggcacaggctcagccaaacagccgagcccagccaatg
tctgcctccatgtccacttcctccgcccatgccacaatctacccgattgaagcaatctcc
ccgtattccaacaaatggacgataaaagcgcgatgcacaagcaaatccagcatcaaaaca
tggcataacaaaaatggtgagggtaaactgttcagtgtgaatctgctggacgacagtggt
gaaattcgtggaaccggtttcaatgatcagtgtgacatgctctatgaactcttccaagag
ggcagtgtttattacatttcgagtccctgtcgggtccaaattgccaagaaacagttcaca
aatcttaacaacgattatgaacttacctttgagagagataccattgttgagaaggccgag
gagcaaaatgatgtccctcagattcgattcaacttcaccaccgttgctgatttgcagact
gttgaaaaagacacgaccactgatgtcattggcgtgctgaaggatgttggagagacatcc
cagattacatcaaaaagcactggcaaaccatatgacaaacgtgagcttacgctggtcgat
aacacgggattttctgtccgcttgacaatctggggtgcatctgcgaacaattttagtgtg
gcgccagagtctgttgttgctttcaagggagtcaaggtttctgactttggcggaagaagt
ctgagtcttttgagttcgggctcaatgactgttgaccctgacatcggggaggctcaccga
ctcagaggttggtatgacgctcaaggaaggtcggagaacttcacatctcatgcttcattg
tccaatgcgacaaactccacgggcaaaacagatcggtttaaaaccgttgcgcaagttcgc
gaagagcagcttggcatgtctgaaactcctgattacttctccctgaaagccactgtaatc
tacatcaagcaagattccacctggtgctaccccgcctgcctttctgagaattgcaacaag
aaggtaacggaacttgatccaggacagtggcggtgcgaaatgtgtgacaagacccacctt
aagccagagtaccgcttcatcatgcccattagtgtcagcgaccatactggtcagctttgg
ctcagctgttttgacgacactggaagaaacatcatgggcatgtctgccgatgaactgatg
caacttcgcgaagacgatccgagtgcttttggtgaagttttccaaggagccaattgccag
acctggagcttcaggtgccgagccaagatagacaacttcggcgaccagcagcgtgtgaga
tatcaggtctcgtcctcccaggcaatcaattactcggatgaagcctctcgccttgccgat
atcattgactcctacagcatcgaaatactcgtcatgggtaagcgaagccatctcgagcca
acggagcagcgaccgaagaaaaagtccaagtccgagaagcccacaaaagcttccaaagac
aagcaggaaaacggagatgagaagactacatcctattctgacgcggccgctctttctgag
atcccccagtcagacattgacagtttcttgactaagaacgtgataaaaatatctgattcc
tcctcacccgacgcctcccaattccgcccaatcctttcgtttgatcacctgcctgaatgt
gacgcgggtctgtatactcaattgaggtctttctccgcaccaacgccgattcagtcctct
acctggccgcttctttttgctggacgtgatgtgattggtattgcagagactggaagtggc
aagaccctgggttttggcttgccttgtctgaagaaattgattgactccaagtcaagcaaa
ccttgtcaacccaaggcagtgattatttcaccaacgcgagagcttgcaatgcagatttat
gaccagcttgttaaattcggcgacactgaaaagactcgggtgacatgcatttacggtggt
gtgggtaaagatgaacagcgtcgggctcttcaaaaggctgccattgtggttgccactcct
ggccgtctcaaggatctcctgaatgatggttcgattgaccttgcaaaggtcacctatctc
gtcttggatgaggcagatcgcatgcttgataaaggatttgaacaggatatcaaggacatt
gtcaagccaatgcccgtctccaggagacagactgtcatgtttacggcaacatggccccgg
tctgttcgagatctcgcagcatcctttatgaagaccccggtaactgtcaccatcggcgga
gacccgtctgcggatcctcgagccaacacaaggatcaagcaagtcgttgaggttattgat
ggtcgggagaaggagggccgactcgtacaactgcttactaaatcccagcgtggtaatcaa
tcgcccgagaaagtcttggttttctgcctctataagaaagaggctatgcgcattgagaat
ctcatcagaaacaagggatttgcagtcgccggcattcacggcgatttgaaccaatcagat
agattccgaaatctcgatgctttcaagaagggcaatgctaccgttcttgtcgcaaccgat
gtggcagcgcgtggccttgatatcccgaatgtgaaactggtgattaatgtcactttccct
cttaccgttgaggactatgtgcaccggattggaagaactggacgtgctggggccgatggc
cttgccatcaccatgtttactgaaactgacaagggactatccggcggattgatcaatgtt
ctcaaggcagctaagcaagacgtgccagaggcgctgttgaagtttggcacaacagtgaag
aagaagcagcacgatgtctacggtgccttttacaaggacgttgatatggaaaaaacagcg
acaaagatcacatttgacgattaa
DBGET
integrated database retrieval system
