Penicillium digitatum: PDIP_60170
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Entry
PDIP_60170 CDS
T04849
Name
(RefSeq) Pre-mRNA splicing factor RNA helicase (Prp43), putative
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pdp
Penicillium digitatum
Pathway
pdp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_60170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdp03041
]
PDIP_60170
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_60170
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PDIP_60170
Spliceosome [BR:
pdp03041
]
Complex A
U2 snRNP components
U2 related factors
PDIP_60170
Complex B
PDIP_60170
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PDIP_60170
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
90S particles
Helicases
PDIP_60170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
T2SSE
ABC_tran
AAA_7
nSTAND3
SpoIVA_ATPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
26234333
NCBI-ProteinID:
XP_014533243
UniProt:
K9G6L1
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MADNRSDSEGGARAKRQKMDAGDPKNNPYLAHMYENSNGSSDNAALAKFKRHQTTAAMAK
KVEDGDINPFSGRPFSSKYFSILKTRRDLPVHTQRDEFLQLYQQSQILVFVGETGSGKTT
QIPQFVLYDDLPQTQGKMVACTQPRRVAAMSVAQRVAAEMDVKLGEEVGYSIRFEDMTGP
KTIMKYMTDGMLLREAMNDPNMSRYSTIILDEAHERTMATDILMGLLKEVVGRRPDLKII
IMSATLDAQKFQRYFMDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAVRTVLQIHATEAEG
DILLFLTGEEEIEDASRKIALEGDEMVREADAGPLKVYPLYGSLPPHMQQRIFDPAPPPR
RPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQ
QRAGRAGRTRPGKCFRLYTEGAFKKELIESTYPEILRSNLSSTVLELKKLGVDDLVHFDL
MDPPAPETLMRALEELNYLACLDDDGNLTQLGRLASDFPLDPALAVMLISSPEFYCSNEI
LSITALLSVPQVFVRPAAQRKRADEMKNLFAHPDGDHLTMLNVYHAYRSDEAQENPKQWC
HDHFLSQRALQSADNVRSQLLRIMERQDLEMISTSFEDKKYYENIRRALCAGFFMQVAKK
DTGGKSQYLTIKDNQNVLLHPSTVLAHEAEWVLYNEFVLTTKNYIRTVTAVKPEWLLDIA
PTYYDINSFPKGDIRSALIRAADRLARKEKMRAEKRR
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaccgatctgactccgaaggtggcgcgcgcgcgaagcgccagaagatggac
gctggggacccaaagaacaacccctacctcgctcacatgtatgagaacagcaatggctcc
tccgacaacgcggccctggccaagttcaagcgacaccagaccaccgcagcgatggcgaaa
aaggtcgaagatggcgatatcaacccttttagtggccgacccttttccagcaaatacttc
tcaatcctgaagacccgtcgcgatctgcctgtccacacgcaacgtgacgagttcctgcaa
ctctaccagcagtcccagatccttgtcttcgttggtgagactggttccggaaagactacg
cagatcccgcaattcgtcctctacgatgatctcccccaaactcagggcaaaatggtcgct
tgtacgcagccccgacgagtggctgccatgtctgtcgcccaacgtgtggcggctgagatg
gatgtcaaacttggagaggaagttggttacagtatccgtttcgaagatatgactggccca
aagaccatcatgaagtacatgactgatggtatgcttcttcgcgaggctatgaacgacccg
aacatgtcgcgttacagcacaatcattcttgacgaggctcacgagagaactatggcgaca
gatatcctgatgggtcttttaaaggaagttgtggggcgtcggcctgacttgaagattatt
atcatgtcagctactctggatgcccaaaagttccagcgctacttcatggatgcacccctt
ctcgcagttcccggtcgtactcaccctgtcgagatcttctacacccccgaacctgagcaa
gactacgttgaggccgcagttcggactgtgctgcaaatccacgctaccgaagctgaggga
gatattcttcttttcttgactggtgaggaagagattgaggatgcttcgcggaaaatcgcg
ctcgaaggagatgagatggttcgcgaggccgacgctggtcctctcaaggtctatcctttg
tacggtagtcttcctcctcacatgcaacagcgcatctttgaccctgcaccgcctcctcgc
cgcccaggcggccgccccgggcgcaaagtcatcgtatcgaccaacattgccgaaacatct
cttaccatcgacggtatcgtttacgtcgtggatcccggattctccaagcaaaagatttac
aacccccgcattcgtgtcgaatcccttctcgtttcccccatttcgaaggcctccgcgcag
cagcgagctggtcgtgccggtcgtacacgtcccggaaagtgtttccgcctctacaccgag
ggcgcattcaagaaggaattgatcgaatcaacttaccctgagatcctccggtcgaacttg
tcatcaacagtgctcgaactcaagaagcttggtgtcgatgatctggtccacttcgattta
atggacccgcctgccccagagaccctgatgagagcgttggaggaactgaactatttggcc
tgcctggacgatgatggaaatcttactcagctgggtcgtctggcctccgatttccctctc
gaccccgccctcgctgttatgttgatcagctcccccgaattctactgctctaatgaaatc
ctttccatcaccgcccttttgtctgtgccgcaggtcttcgtgcgtcctgctgcccagcgc
aagcgtgctgacgagatgaagaacctgtttgcccaccccgacggagaccacttgacaatg
ctgaatgtctaccacgcataccgaagcgatgaagcccaggaaaaccccaagcagtggtgc
catgaccacttcctctcccagcgtgctctccagtccgctgataacgtccgttcccagctg
ctccgcatcatggaacgccaggatctcgagatgatctccacttccttcgaggacaagaag
tactacgagaacatccgccgtgccctatgtgccggtttcttcatgcaagtcgcgaagaaa
gatacaggcggcaagagccaataccttaccatcaaggacaaccagaatgtgctcctgcac
ccctccaccgtcttggctcacgaggccgagtgggtcttgtataacgaatttgttctaaca
accaagaactacattcgtactgtcactgcagtcaagccagaatggcttctagatattgcc
cctacatactatgatatcaacagctttcctaagggtgacattcgctctgctcttattcgg
gccgctgatcgtctcgctcgcaaggagaagatgcgcgctgaaaagcgtcgatag
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integrated database retrieval system
