Penicillium digitatum: PDIP_60270
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Entry
PDIP_60270 CDS
T04849
Name
(RefSeq) Transcription factor TFIIH subunit Tfb4, putative
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
pdp
Penicillium digitatum
Pathway
pdp03022
Basal transcription factors
pdp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PDIP_60270
09124 Replication and repair
03420 Nucleotide excision repair
PDIP_60270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdp03021
]
PDIP_60270
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_60270
Transcription machinery [BR:
pdp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PDIP_60270
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PDIP_60270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
26234343
NCBI-ProteinID:
XP_014533253
UniProt:
K9G6M0
A0A7T6XNA3
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MNSVDASEHYELGATDLSPSLLTIVIDTNPHAWAILEHSLPLSKAIANILVFINAHLACN
YANEVAVVASHCQKAAWLYPSHNAPRNRTADHDSDVAMNGASDTQPPETNKYRPFRIVEE
QVTRNLKELMDSTTGDDLRGNMSTMLAGALTLALSHTNRRALAWAEEHGGTNNEDAAADG
NGNGNGNGNGNGHGGGTSASVNRYSASNEDERLQSRILVISVSGSTDAAHQYIPIMNSIF
ACQRLNIPIDVCKLSGDAVFLQQASDATKGVYMALAEPRGLLQYLMMAFLPDQRSRRHLV
LPTRVDVDFRAACFCHRRVVDVGFVCSICLSIFCGPPPGSDCMTCGTHLDIGDNAKPALL
PRKKKKKKRVNGTSTTGTPISTPTPGP
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgtggatgcctcggagcattatgagttaggagctacggacctctccccgtcc
ctgctcacaatagtcatcgacacaaacccacacgcctgggctatcctcgaacactctctc
ccactctccaaagcaatcgccaatatcctagtcttcatcaacgcccacctagcctgcaac
tatgccaacgaagtcgccgtagtcgcatcgcactgccaaaaagcagcatggctctaccca
tcccacaatgcaccccggaaccgtaccgccgaccatgacagcgacgtcgcaatgaatggc
gcaagcgacacccaaccccccgaaacgaacaaataccgtcccttccgtattgtcgaagaa
caagtcacccgcaacctcaaagagctaatggactcaacaactggcgacgatctacgtggc
aacatgtccacgatgctagcaggcgcgctaacactcgccctgagccacacgaaccgacgc
gcgctcgcctgggcggaggagcatggcggcaccaacaacgaagacgcagcagccgatggc
aatggcaatggcaacggcaacggcaatggaaacggacacggcggtggcacgagcgcatct
gtgaatcggtactccgcctcgaacgaggatgagcggctgcagagtcgcatcttggtcatt
tctgtgagcgggtctaccgacgccgcacaccagtatatccctatcatgaacagcatcttc
gcctgccagcgcttgaacatccccatcgatgtgtgcaagcttagtggcgatgcggtcttc
ctgcagcaggcgtctgatgctaccaagggtgtttatatggcgcttgccgagccacgaggc
ctgctgcagtatctgatgatggcgttcttaccggatcagcgctcgcgtcgccatctggtt
cttcccacgcgggtggatgttgatttccgggctgcttgcttttgtcatcgccgggtggtt
gatgttggctttgtgtgctccatttgtctcagtattttctgcggaccgccccctggtagt
gattgcatgacttgtggcacgcatctagacatcggagataatgccaagccagctctattg
ccaaggaaaaagaagaagaagaagcgtgttaatgggacatccacgacggggacgcccata
tcaacacctacgccgggtccttga
DBGET
integrated database retrieval system
