Penicillium digitatum: PDIP_61190
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Entry
PDIP_61190 CDS
T04849
Name
(RefSeq) MRNA cleavage and polyadenylation specificity factor complex subunit (Pta1), putative
KO
K06100
symplekin
Organism
pdp
Penicillium digitatum
Pathway
pdp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PDIP_61190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdp03021
]
PDIP_61190
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_61190
Transcription machinery [BR:
pdp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PDIP_61190
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
PDIP_61190
U7-dependent histone pre-mRNA processing factors
PDIP_61190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
26234435
NCBI-ProteinID:
XP_014533345
UniProt:
K9G604
A0A7T7BLU7
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MAQPMDNVIDQVAQLNAARSLVLGDAAFYPQIVNGILPIVGAGTRLELRRWGANFLAETF
ASPMLAVAQKEQLAPNVLQTIREILELPETDTAVLQSLVQTSASLYPLVFRHVVNHPQDG
KSWETMSAIKQDILRRMDSFPCPVKLCCAKFIQRVVQVQTPGLISDPRRPDQNETSLAVV
PRNHAVLSIPNLEAESSGLLDRLLSVFQEEISDALLVNGTLNCLAPLIRTRQSIANKIIN
AVLDFYPAKHVCPPFTPTVRVSVKSMERTARALLINILKKNPNHPLSGRIQMYLERLMQS
RLEVTDDASRKRGLPNEPTDGLDNAKRARLNALLPPMLKIPPMAPGPASFDRLFTLTDDT
GLSSFDVKQLPVDLVLKIVVPLLSQVHDSTLAQAVDAVRTRYQTITKDQNLQRQQQQRAA
ALDEDDDYEPEYQPMDVASVVSEEDSAIAAEVADLQPELVSLGPFVLPQPPPLTEEEAGE
IGRSAVARVFGMLSAAETSPAPAKGQPHQKLGFARLAGSTFDRDAWSVLLARLATRAPAG
LENDQQNKGDAVRRQTTIADSIRETLYRFILEDFRGRLNIAIIWLNEEWYNDRIQMKSVA
KQRDDTEEGSELTVSLNYDTWATRLLDGFLAYLDSRDIKVLVRFLSEVPEITIPITQRVA
SLAKDPERVNLCVQSLMYLIMFRPPAREMCLNTVEDVYQTYEESRPAACKVLSKWRPQSS
ALGTAENGALESSEAKSNTSEP
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcccagccgatggacaatgtcatcgaccaggtcgcccagctcaacgctgcccgcagc
ctcgtcctcggtgatgctgctttctacccgcagatcgttaatggcatccttcctatagtc
ggagctggtacacggctagaattgcggagatggggtgcaaacttcctggcagaaaccttt
gctagcccaatgttagctgttgcgcagaaagagcagctggcaccgaatgtcctgcagaca
atccgtgagattctagagctaccggagacagacacggcagtcctacagagcttagtgcag
acttcagctagcttgtatcccctcgtcttcagacatgtagtgaatcacccgcaggatggc
aagtcatgggaaacgatgagtgcaattaagcaggatatacttaggagaatggactcgttc
ccatgcccggttaaactttgctgtgccaagttcatccagcgtgtggtccaggttcagacg
ccgggactgatctcggaccccagacgaccggaccaaaatgagacgtctttggcagttgtt
ccccgaaaccatgctgttctgtcaataccaaacctggaagcggaatcctccggtctcctc
gatcgactactcagtgttttccaagaagagatcagtgatgctcttcttgtgaacgggacc
ttaaactgcctcgctcctctcattcggacgcgccagtccatagcaaacaaaatcattaat
gctgttttggatttttatcctgcgaaacacgtctgcccaccatttactccgacagttcgc
gttagtgtcaagtctatggaacgtacggctcgagctctgcttatcaatatcttgaaaaag
aacccgaatcaccctctgtcaggtcggatacaaatgtatcttgaacgtctaatgcaatca
cgacttgaggtcaccgatgacgcttcgcggaaacgtggattgccaaatgaacctactgac
gggctggacaacgctaagcgggcgcgtctcaatgctttacttcctccgatgcttaagatt
cctccgatggcgccgggtcccgcaagctttgaccgactcttcactctgaccgacgacacc
ggactgtcctcctttgacgtcaagcagcttccagttgatctagtcctcaagattgttgta
cctctcttgtcgcaggtacatgattcaacacttgcacaagctgtcgatgctgttcgtact
cgatatcagacaatcaccaaagatcaaaacctgcaacggcagcagcaacagagagcagct
gctctagatgaggatgatgactatgagcccgaataccagcccatggacgtagcatctgtt
gtttcggaagaggacagtgccattgcagcggaggtagcagatttacaaccagaacttgtc
tctttgggtccctttgtcctgccacagccacctccattgaccgaagaagaggccggagaa
atcggacggagtgctgttgcacgcgtatttgggatgctaagcgcagccgaaacttcacct
gcacccgccaagggtcaaccccatcaaaagctcgggtttgccaggctagcaggcagtaca
ttcgaccgggacgcatggtctgttcttcttgctcggttggctacacgggctcctgctggt
ctcgaaaatgaccagcaaaataagggagacgccgtacgtaggcaaacaactatcgctgac
tcgatccgtgagacactctatcggttcatcttggaagatttccggggacgactcaacatt
gccattatctggctcaatgaagagtggtataacgaccggattcaaatgaagagtgttgcc
aaacagcgtgatgacactgaggaaggctcggaacttactgtgtctcttaattacgatacc
tgggccacccgacttttggatggctttctggcttatctggactctcgagacatcaaggtg
cttgtccgatttcttagtgaagttcctgagatcaccattcccatcactcagcgggtggcc
agcttagccaaagatccggaacgtgtgaatctttgtgttcaatcattgatgtacctgatc
atgttccgacctccagcacgagagatgtgtttgaacacagtagaggatgtctaccagact
tatgaagaatctcgacctgctgcgtgcaaagtcctctccaagtggcgcccgcaaagctca
gctctggggactgctgaaaatggcgcactggagtcatcagaggcgaagtctaacacttca
gagccataa
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integrated database retrieval system
