Penicillium digitatum: PDIP_61490
Help
Entry
PDIP_61490 CDS
T04849
Name
(RefSeq) tRNA-splicing endonuclease, putative
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
pdp
Penicillium digitatum
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdp03021
]
PDIP_61490
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PDIP_61490
5.6.2.5 RNA 5'-3' helicase
PDIP_61490
Transcription machinery [BR:
pdp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PDIP_61490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEN1_N
AAA_11
AAA_12
SEN1_barrel
AAA_30
UvrD-helicase
AAA_19
Viral_helicase1
nSTAND3
DEAD
ResIII
SLFN-g3_helicase
TPR_MLP1_2
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
26234465
NCBI-ProteinID:
XP_014533375
UniProt:
K9G9R2
A0A7T6XNG4
LinkDB
All DBs
Position
Unknown
AA seq
2154 aa
AA seq
DB search
MEFLAAIRELKALPEAIHLFCPRKDDDDHGRYENLEQVDEGGKAIKDIVAEATARRESFL
SSMRILAYHKDGVEDDQNWILCKLDESLEKCDLCIKHYYIGKIWLMDLLKEENYHEDDIE
AFAQRIDEWDIRRITRNLTTAKTQLKQIPLEKIGLDVLDRAALLSIFETLSCEAMLRNES
LLQEYFDEPFKLIQTKRSLKVSDYIPAVSRFLFDSNQFRSFWAIQSWSRYPRSPTTQEFE
WAVRDGLLMGLRAASQQPPQFAVIQRLWRGMPLVVRKLDKEQITHQLRGLEIDPCRLSVD
HLAIPAPSLRFLLNTIQLFLEKAPVDFWDAMQTISPQAIMEQTFFNTQFSAFLLETSEGE
PFERSALKDMLSWINPFLGSLKGAHQPSACRFLALQLLGRLQDTQYPNLSRYHCFDIGLA
SLLQTLRRFTENESSRGTVTRIVLAETMGVVGDTINVIINPPTFDIERSRQEDIRAQRME
VVRNTLALECQSLKTDYEALLKHGTLAHGVSTYSAPIWDAVIKHLHRDNLPLSSSALLGI
LPLVGLEMFPTKGEGNKEKTHFNMIYGHLTNLSSRIIGRLADFPPEHLETLFRSQDTSSA
VISALFAADYDTYTAAVDLIKAVSSQSARRDAISHLLQSSFTTTIYGLSWSFRRISNMKT
FAPAPRMLHTGTDIVEILCDSQTGMLRTRNLTDRREVMSLQKLWEYLWLALTTIFDETEA
WHLRGNDKTVMLEFCRDTIQFADLLFDQYGVFLGAVGNADPGQTSASENFLKSPTATMSA
MVKWLRLKDEFLATTLVGLVSKLLRRLGGMNVTTVRPDALSFIEGVAVNGTIKTILNQRE
KAELVRSLEAYYKKPVVTASTASLKKQSSITAFAKPSDVSSPSSRITSDDDFDDDILNDQ
TLLELSSSVEFNKARLATQAKREAEKAAKMRSSTAVKNRPEIFRPNMFPKSVPPVRANDD
TTHVLSFREKREREREAKKKRDLIELARLKKNTPAHGVGEQTAEQGSGLKGIGIKGKDHT
TPADSMMVSSGDESDSESEDELDKELFGAKPKKPDAVAAYELSKKQSLQQQPIKKVKRHR
SVRDMRARLAPDLGSLHHSILSWDFFATGDLPPTTDRTDYSLVSNTFRTPDDYQRTFEPL
LILEAWQGFQQAKDEGSFRPFEVKVMTRLAVDSWIEFSTQPLGLPPKDFSLGEGDLVLFS
NSPKLTSDPSVPHVLARVCGVNRKNKKMEVTYRVNPGNNKFLSSFGPGTEAWGAKITSLT
PVEREYGALMALQYYDLCEEIVLAKPSPLLTYSDTRLQPIMDNYSINRAQARAIKSAVDN
DAFTLIQGPPGSGKTKTIIALVGSLLSDVLGKQLIKVNGAPVARNALSKKLLLCAPSNAA
VDELVMRLKDGVRTTNGRQEKVSVLRLGRSDAINTKVLDVTLDEMVNARLNQDPSKGNGV
DLQKLYEEHKTTDTSFKELRGQLDEARAKGLPPPEELEREFDLMKKKRSQLSTSIDKARD
QNHTLARNADMHKRRIQEQIINESHVICTTLSGSGHEIFQGMNVEFETVIIDEAAQCIEL
SALIPLKYGCSKCVLVGDPKQLPPTVLSKMASKFQYEQSLFVRMQKNHPQDVHLLDIQYR
MHPAISHFPSVTFYDGKLQDGPDMAKLRQRPWHQSELLSPYRFFDVQGMHSSAARGHSLI
NYAELQVAMQLYDRLITDVKEYDFAGKIGIITPYKGQLRELKNQFTQRYGEDILRKVDFN
TTDAFQGRESEVIIFSCVRASNKGIGFLADIRRMNVGLTRAKSSLWVLGNSQSLEQGQFW
NGLIKNARERNVYTEGDIVKILQKPQFTGYKEIEMVDLGTEETPDSPDYEPPAPPISRPS
SASVGLDSRSVSVSTSRRSSPSISRPDGPSGGSKGLDPTKMCGICGSANHFTHNCDNDEA
KANARGNCLRCGRAGHTKVACRAERCLECGECGHSSHNCKSTKVLSKFEKSRLGRDELNL
KQRQDSFTERQRQRQLGGHNPKIPVVQATNANPPANPVDSYTKRKRDDSSSDGPQAQRPR
TGQPHPPNNAPRGPLGRGHPGLSGHPGLSGPSRDNPVANARHGNKGPATNCPPGGLIKPS
RDGQAYPTENDPTRAPPMRPGAYAPNQAAPKPRPPMIRKKKETDPFIRPKPKRK
NT seq
6465 nt
NT seq
+upstream
nt +downstream
nt
atggagtttctggctgcgattagagagctcaaggccctcccggaagccatccacctcttc
tgcccccggaaagacgacgatgatcacggacgctatgaaaatttagagcaagtggatgaa
ggtgggaaagctattaaggatattgtggccgaagcgactgctcgaagagagagttttctc
tcatccatgcgcatcctggcataccacaaggatggcgtagaggacgatcagaactggatc
ctgtgcaaactagatgagtcgctggagaaatgtgatttatgcatcaagcattattacatt
ggtaagatttggctcatggacctgctgaaggaggagaactatcacgaagatgatattgag
gcattcgcccagagaatcgacgagtgggacattaggcgaatcactcgcaacttgacaacc
gctaaaacacagttgaagcaaatcccattggaaaaaattggcttggatgttttagacagg
gctgcgttactgtcaatcttcgagacactgagctgtgaagccatgctgcgcaatgaaagt
cttctgcaggaatatttcgatgagccattcaagctcattcaaacaaaacgaagcttgaag
gtttcagattacattcctgcggtctctcgctttctttttgattctaatcaattccgaagc
ttctgggctattcagtcatggtcacgatacccgcggtctcccactacccaagaatttgaa
tgggcggtacgcgatggcctcttaatgggcctacgagctgcatcacaacagccaccacaa
tttgcagtcattcagaggttgtggcgaggcatgccgctcgtcgtccgaaagctggacaaa
gagcagattacacatcagcttcgaggtttggaaatagacccttgccgtctctccgtggat
catctcgctatacctgcaccaagcttgcgattccttctcaacacaatccaactattcctt
gaaaaagctccagttgacttttgggatgcaatgcaaacgatttctccccaagcaatcatg
gaacaaacttttttcaacacacaatttagtgcatttctcttagaaacctctgaaggtgag
ccttttgagaggtcggcattgaaagacatgctctcctggatcaatcccttcctcggctca
ttgaagggtgcccaccagccatctgcctgtcggttcttggcattacaattactcggtcgc
cttcaagatacccagtatcccaatttgtcacggtaccactgctttgatattggcttggcc
agcctccttcaaacactacgccgcttcacggaaaatgaatcttcccggggcacagttact
cggatcgtgttggcagagacaatgggagtggttggtgatacaattaacgtaatcatcaac
cctccgacttttgatattgagcgaagtcggcaggaggacattcgcgcgcagcgcatggaa
gttgtacgcaacaccttggcattggagtgtcagtcattgaagaccgattatgaggccctt
ttgaagcacggtaccctcgcccacggagtttctacctactcggcgcccatatgggatgct
gttattaagcacctccaccgagacaacctcccgctatcaagttcggccctcctaggaatc
ttgcccctggttgggttagagatgtttcccacgaaaggagaagggaacaaggagaagacc
catttcaatatgatctatggccatctcaccaacctctcaagtcggatcatcgggcgactc
gcagacttcccacccgagcaccttgaaacgttgttccgaagtcaggatactagtagcgct
gtgatttcggctttgtttgccgccgactatgacacttacacagctgcagttgatctgatc
aaggccgtcagcagccagtcagctcgacgagatgccatctctcacctcctccaatcttcg
ttcacaactacgatctacggcctcagttggtcatttcgtcggatctctaacatgaagacc
tttgcacccgccccaagaatgctacacactggtacagacattgtagagatattatgtgac
agtcaaactggtatgctgcgaactcgtaacctcactgatcgccgggaggtcatgtcgctg
cagaagctctgggagtatctgtggctggcattgactacgatctttgatgagaccgaggca
tggcaccttcggggtaatgataagactgtcatgcttgaattttgccgtgacacgatccag
ttcgccgaccttctctttgatcagtatggtgtgttcttgggggctgtagggaatgcagat
ccggggcagacctctgcctccgagaatttcctcaagtcaccaactgccacaatgagtgcc
atggtaaaatggcttaggttgaaggatgagtttcttgcaactactctcgtagggctggtg
tcaaagcttctacgcaggctgggtgggatgaatgtgaccactgtgaggccagatgcattg
agctttattgagggagttgctgtcaatggcacaatcaaaacaatcctcaatcaacgtgaa
aaggcagaattagtccgctcattggaggcgtactacaagaaacctgtcgtcactgcctca
actgcttctctcaagaagcagtcttcgatcaccgcttttgccaaaccctctgatgtctcg
agcccttcctctcgcatcaccagtgacgatgactttgatgatgatattttgaacgaccaa
actcttcttgaactgtcttcttctgtcgaattcaacaaagctcgcctcgcaacccaagct
aaacgggaagctgaaaaagcagccaaaatgcgatcctcaacagctgtcaagaaccgtccg
gagatattccgtccgaacatgtttcccaagtcagttcctcctgtgcgcgccaacgatgac
accacccacgttctatctttccgggagaagcgcgaacgggaaagggaggccaagaagaag
cgtgatctgattgagctcgcgagactcaagaagaatacgcccgcacatggtgttggggag
caaacagctgaacaaggctctggcctgaaaggtattggtatcaagggtaaagatcataca
acccccgcagacagcatgatggtttcatctggtgatgagtctgattccgagagcgaagat
gagttagacaaggaactctttggtgccaaaccgaagaaacccgatgctgtcgcggcctat
gaattgagcaagaaacaatctctccaacagcaacccatcaaaaaggtcaagcgccatcgg
tctgtcagggacatgcgggctcgcctggctccagatctgggttctcttcaccactcaatc
ctctcttgggacttttttgcaaccggcgatcttcctcccaccacggaccgcactgattat
tccctggtctcaaacacgttccgcacacccgatgactatcagagaacattcgaacctttg
ttgattcttgaagcgtggcaaggtttccaacaggcgaaggacgaaggttctttccgaccc
ttcgaagtcaaagtcatgacccggctggctgtcgactcgtggatcgaattcagcacccag
ccgcttggtcttcccccaaaggattttagcttgggtgaaggtgatttggtgttattctcc
aactcgcccaaactcacaagtgacccaagtgtgccccatgttctcgcgcgtgtctgtggt
gtcaatcggaagaataaaaagatggaggtcacatatcgggtaaatcctgggaacaacaag
ttcctgtcttcttttgggccggggaccgaggcctggggcgccaagattacttctttgacc
ccggtggagcgtgaatacggtgctctgatggcgttgcagtactatgatctatgcgaagag
attgtcttggctaagccttcacctcttctcacttattcagatacaaggctgcagcctatc
atggataattactccatcaatcgtgctcaggccagagccatcaagtcagctgtcgacaac
gacgcatttactctcatccaaggtcctcctggctcgggaaagaccaagaccatcatcgca
cttgtcggaagtctcctaagcgacgtacttgggaaacaattgatcaaagttaatggtgct
cctgttgcgagaaacgctctttcgaagaaacttctcctgtgtgcgcctagtaatgccgct
gtcgacgaattggtcatgcgattgaaggatggtgtgaggacgactaatggtcggcaagaa
aaggtctctgtcctgcgtctaggaagaagtgacgcgatcaacaccaaggtgttggacgtc
accctcgatgagatggtcaatgcccgtctgaaccaggatcccagcaaaggaaatggagtc
gacttgcagaagctctacgaagagcataagacaactgatacttcattcaaagaacttcgg
gggcaacttgacgaggcacgagcaaagggattacctcctccggaagagctagagcgcgag
tttgacttaatgaaaaagaagcgatctcaactcagcacttccattgataaggctcgtgat
cagaaccatacgctggctcgtaatgctgatatgcataaacggcggatccaagaacaaatc
atcaacgaatctcatgtcatttgcactacccttagcggttctggacatgaaattttccag
ggtatgaatgtcgagtttgagaccgtcatcatcgatgaggcggcacagtgtattgaactc
agtgctcttatcccactgaagtacggctgctcgaaatgcgttcttgtcggtgatcccaaa
cagttgcctccaactgttctatcaaagatggcctccaagttccagtacgaacaaagtttg
ttcgtccgcatgcagaagaatcaccctcaagatgtgcacttgctggatatccagtaccgt
atgcatccagccataagtcatttccccagtgttacgttctacgatggcaaattgcaggat
ggaccagacatggctaagcttcgccagcgtccgtggcatcaaagcgagcttctcagtcct
taccgatttttcgatgttcagggcatgcactcatctgcggccagaggccactccttaatc
aattacgcagagttacaagtggccatgcaactgtatgatcgtttgatcacggacgtgaaa
gaatatgacttcgcgggcaagattggcatcatcacaccttacaagggccaactgagggag
ctcaagaaccagtttacccaacgatacggcgaagacattctgagaaaggttgatttcaat
acaaccgatgccttccaaggtagagaaagcgaagtcattatcttttcttgtgtgcgtgca
tccaacaagggaattggtttcttggctgatatccgccgtatgaacgtcggtctcacccgt
gccaagtcatcgctttgggttctgggtaactcgcagtccctagaacagggtcagttctgg
aatggtctcattaagaacgcacgggagcgaaatgtctacacggagggtgatattgtgaaa
atcctgcagaagccgcagttcaccggctacaaggagattgaaatggtcgaccttggcacc
gaagaaacaccagactcacccgactatgaaccccctgcaccacctatttcccgaccttca
tcggcctctgttggccttgactcgcgctccgtctcggtctctacttctaggcgtagttca
ccctcaatttcacgaccggacggaccttctgggggaagcaagggcttagatccgacgaaa
atgtgtgggatctgtggaagcgccaaccacttcacccacaactgcgacaatgacgaggca
aaggcgaatgctcgaggaaactgtttgcgctgcggtcgggctggtcacaccaaggttgcc
tgccgtgctgaacgatgccttgaatgcggcgaatgtgggcattcgtcccacaactgcaag
tccacaaaagttctttcgaagtttgagaaatctcgccttgggagggacgagctcaacctc
aagcaacgtcaagattcattcaccgagcgacagcgacagcgtcaactgggaggccataac
cccaaaatccctgttgttcaagctacgaatgcaaacccaccagcgaaccctgttgatagt
tacacgaagagaaaacgtgatgactcttcctctgatggaccacaagcgcaacgtcctcgt
accggacagccgcatcccccaaacaatgcccccaggggcccattgggtcgtggtcatccc
ggtctttctggtcacccgggtctttctggtccctctcgcgacaacccagtggccaatgct
cgccatggcaacaagggcccggcaaccaactgcccgccaggaggtcttatcaaaccttct
cgcgatggccaagcgtatccgaccgaaaatgacccgacaagggccccgccaatgagacca
ggagcatatgctcccaaccaagctgctcccaagccccgacccccgatgatccgcaaaaag
aaggagacagatcctttcatccggcctaagccaaagcgcaagtaa
DBGET
integrated database retrieval system
