Penicillium digitatum: PDIP_63890
Help
Entry
PDIP_63890 CDS
T04849
Name
(RefSeq) RNA helicase (Dbp), putative
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pdp
Penicillium digitatum
Pathway
pdp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_63890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdp03041
]
PDIP_63890
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_63890
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PDIP_63890
Spliceosome [BR:
pdp03041
]
Complex A
U1 snRNP components
U1 related factors
PDIP_63890
Complex B
PDIP_63890
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
Pre-60S particles
Helicases
PDIP_63890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
26234705
NCBI-ProteinID:
XP_014533615
UniProt:
K9G8L9
A0A7T6XNZ1
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MSYGGGYSRGGGGGGDSYRSRGGEGGYSNGGYGGGGGYGGGRGGGSGGGYGGGYGGGGGG
GYGGGAAGGDRMNNLGAGLKTQDWDINTMPKFEKSFYKEHPDVTARSEEDVQAFRKSKEM
AIQGTNVPRPVETFDEAGFPAYVLSEVKAQGFDAPTAIQSQGWPMALSGRDVVGIAETGS
GKTLSYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQAEITKFGKSSRIRNTCVY
GGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQI
RKIIGQIRPDRQTCMWSATWPKEVRQLASDFLNDYIQVNVGSTDLSANHRITQIVEVVSD
FEKRDKMIKHLEKIMEDRSNKCIIFTGTKRVADEITRFLRQDGWPALSIHGDKQQNERDW
VLNEFKQGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTARAGAKGTAI
TFFTTENSKQARDLVTILTEAKQQVDPRLAEMVRYGGGGGGGRWGGRGRGGGRGGWGGGR
GGGGGGFTASNAAPVGGNRRW
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacggaggtggctactctcgcggtggcggcggcggcggtgactcctaccgctcc
cgcggaggtgaaggcggctactctaacggtggctacggcggcggcggcggttacggcggt
ggccgtggaggagggagcggtggtggttacggcggcggctacggtggtggaggtggtggt
ggctacggcggcggtgctgccggtggtgaccgcatgaacaacctcggcgctggcctgaag
actcaagactgggatatcaacaccatgcccaagttcgagaagtcattctacaaggagcac
cctgatgttactgcgcgctccgaggaagatgttcaggccttccgtaagtctaaggagatg
gccattcagggtaccaacgtaccccgccctgttgaaacctttgatgaggctggtttcccc
gcgtacgttttgtccgaagtcaaagcccagggctttgatgctcctactgctattcaatcc
cagggctggcccatggctttgtccggccgtgacgtcgtcggtattgccgagactggttcc
ggcaagactctcagttactgtctccccgccattgttcacatcaacgcccagcctctcctt
gcccctggtgatggtcccattgtccttgttctggctcctactcgtgagttggctgttcag
attcaggctgagattaccaagttcggaaagtcctcccgcattcgcaacacctgtgtctat
ggtggtgtccccaagggtcctcagattcgtgacttgtctcgcggtgttgaggtttgcatt
gccactcccggtcgtctgattgatatgctcgaggctggccgcaccaaccttcgtcgtgtc
acttacctcgttcttgacgaggccgatcgtatgcttgacatgggtttcgagccccagatt
cgcaagatcatcggccagattcgccccgatcgtcagacgtgcatgtggtccgctacctgg
cccaaggaagtccgtcagctcgcttctgatttcctcaacgactacatccaagtcaatgtc
ggctccaccgatctttccgccaaccaccgtatcacacagattgtcgaggtcgtctcggac
tttgagaagcgtgacaagatgatcaagcaccttgagaagatcatggaggaccgctccaac
aagtgcatcatcttcactggtaccaagcgtgtcgcagatgaaattacccgattcctccgt
caggacggctggcctgcgctttctatccacggtgacaagcagcaaaacgagcgtgactgg
gtcttgaacgagttcaagcagggcaagagtcccatcatggtggccaccgatgtggcctcg
cgtggtattgatgtgcgcgacatcactcatgtcctcaactatgattaccccaacaactcg
gaggactatgtccaccgtattggccgtaccgctcgtgccggtgccaagggcactgccatc
actttctttaccactgaaaactctaagcaggctcgtgatttggtcactatcctcactgaa
gctaagcagcaggttgacccccgtcttgccgagatggttcgctacggcggcggcggcggt
ggtggtcgctggggtggccgtggacgcggtggtggccgtggtggctggggtggtggtcgt
ggcggcggcggtggtggtttcactgcctccaatgctgctcccgtcggcggcaaccgtcgc
tggtag
DBGET
integrated database retrieval system
