Penicillium digitatum: PDIP_64660
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Entry
PDIP_64660 CDS
T04849
Name
(RefSeq) Nonsense-mediated mRNA decay protein (Nmd5), putative
KO
K20223
importin-7
Organism
pdp
Penicillium digitatum
Pathway
pdp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PDIP_64660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_64660
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
PDIP_64660
Pre-60S particles
PDIP_64660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IBN_N
Cse1
TPR_IPO5
HEAT_GCN1
HEAT_IPO9_c
Xpo1
TPR_IPO11
RTP1_C1
DUF8764
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
26234782
NCBI-ProteinID:
XP_014533692
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MDVTALRDRIQSTLDANADIRRQAELDLKYAETQPGFINGLLDILQGEQNNAVQLSAGVY
LKNRITRGWAPVEDSPQRTPIPDAEKPSFRERLIPALASTPPNVRNQLVPLLQKILQNDF
PEQWPGFLDLTLQLLGTNDASTVYAGLQCLLAVCRVYRFKAGEKREEFDKIVELSFPQLL
SIGSKLVDEESLEAAEMLRIVFELSPCLQTHQATVDWCTLFLRIVSKTPPASSMGDSKEE
REMNHWWKCKKWSYANLNRLFIRYGNPTTITKSSTPDYTPFAKTFISTFAPEILKGYLTE
IDKWVSKTQWLSNSALSYTLVFMEECVKPKAMWDHLKPHMDNLIAHFVFPILCQSDEDIE
LFEDDPSEYLHRKLNFYEEVSAPDVAATNFLVSLTKNRKKQTFAILTFVNSVVSKYESEP
EEQKQPREKEGALRMIGSLASVILGKKSPIADQVEYFFVRHVFPEFRSPHGFLRARACDT
LEKFEQLDFKDPNNLMVIYRNILESMTDSELPVRVEAALALQPLIRHDIIRTSMQQNIPQ
IMQQLLKLANEVDVDALANVMEDFVEVFSAELTPFAVALSEQLRDTYMRIVGELLERNAS
KGGDEDGYGDFLDDKSITALGVLQTIGTLILTLESTPDVLLHLETILMPVISITLENKLY
DLYNEIFEIIDSCTFASKTISPSMWQAFELIHKTFKAGAELYLEDMLPALDNYVAYGSDM
LVQNPAYLDAMVGMVQDIFSDEKVGGVDRICGCKLAETLMLNLRGHIDQYIPLFIEMAMR
VIDAGEASTRSYRIHLMEMVINAIYYNSALSLQVMEAKGWTNKFFSTWFANIDNFRRVHD
KKLSIAAISSLLTLKAADVPTLPAALKQREDATRESDFTLDDEDDEDDEENDWDGDVEWD
ENEVEAALEEDDVPDESAAYLDFLNQEAQKFGSYADDDDDDMDEESLLETPLDKVEPYGM
FKHVLLSLQQEQPQLYESLTKVLGPEEQQVIQGVFHEADAKAMVAAANAEAAAAAGMQAN
GN
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcacagccctccgagatcgcattcagtctactctagacgcgaatgccgatatt
cgccggcaagcagagcttgatttgaaatatgccgagacgcaacccggatttatcaatgga
ctcttggatatcttgcagggcgagcagaacaacgcagtccagctttctgctggtgtttac
ctgaagaaccgaattacacgtggatgggcccccgttgaagatagcccgcagcgtacgccg
attcctgatgccgagaagcccagtttcagggagagactcattcctgcactggcctcgacg
cctcccaatgtgcgcaatcaactggttcccctcctccagaagatcctccaaaacgacttc
cccgagcagtggcctggattcttggatcttactctgcagctcctcggtaccaatgacgca
agtacggtctatgcgggtctgcagtgtcttttggcagtgtgccgggtttacagatttaag
gccggtgagaaaagagaggagttcgataagatcgtggagctttcattcccccagctgctt
agcataggatcaaagcttgtggatgaggaaagtttggaggctgcggagatgctccgtatc
gtgttcgagctttctccatgcctacagacccatcaggcgactgtggactggtgcacactg
ttcctgcgtattgtctctaagacaccccctgcgagctccatgggtgattcaaaggaggag
agggagatgaaccactggtggaaatgcaagaagtggtcatacgccaacctgaaccgcctg
ttcatcagatatggcaaccccactacgattacgaaatcatccacccccgactacacaccg
tttgcgaagacctttatcagcaccttcgcccccgaaattctcaagggatacctgacagag
attgacaagtgggtgtctaagacacaatggctcagcaactccgccctttcatatactttg
gtcttcatggaggagtgtgtcaagcccaaggctatgtgggaccacctgaagccgcacatg
gacaacctaatcgcccacttcgttttcccgatcttgtgtcagtctgacgaggacattgaa
ctgttcgaggatgatccatctgagtatctccaccgcaaattgaacttctacgaggaagtg
tctgctcctgacgttgccgccacaaacttcctggtttccctcaccaagaaccgcaagaag
cagacttttgcgattctcacattcgtgaatagtgttgttagcaagtatgagtctgagccg
gaggagcagaagcagcccagggagaaggaaggtgctttgagaatgattggatcgcttgct
tccgtcatcctgggcaagaagagcccgattgccgatcaagttgaatacttctttgtccgt
cacgttttccccgaattccgcagtcctcacggcttcctccgtgctcgtgcttgcgacacc
ttggagaagttcgagcagctcgacttcaaagacccgaacaacctcatggttatctaccga
aacatcctcgagtccatgaccgattctgaacttcctgtgcgagtcgaggccgcccttgct
ctgcaacctcttatccgtcatgatattatccgtacatcgatgcagcagaacatcccacag
atcatgcagcagcttctcaagttggccaatgaggtcgatgtggatgctctggctaacgtt
atggaggattttgttgaggtcttctctgctgagcttactcccttcgctgtggcgttgagc
gagcagcttcgcgatacttacatgcgtattgttggtgagcttttggagcgcaatgcttcc
aagggtggcgacgaggatggctacggcgacttcttggacgacaagagcattaccgctctg
ggtgtgttgcagactattggcaccctcattctcacgctcgaaagcacccctgacgtgctt
ctgcaccttgagaccatcttgatgcccgtcatcagcatcaccctggagaacaagctttat
gatctctataacgaaattttcgagatcattgatagctgcacattcgcatccaagaccatt
tccccgtccatgtggcaagctttcgagctgattcacaagaccttcaaagctggtgcagag
ctgtatctcgaagacatgctccccgcccttgacaactatgtcgcttatggctctgatatg
ctggttcagaacccagcctacctcgacgctatggtcggtatggtgcaggacatcttctct
gacgagaaggttggtggcgttgaccgcatctgcgggtgcaagcttgctgagaccctgatg
ctcaaccttcggggtcacattgaccagtatattccccttttcattgagatggctatgcga
gtcatcgacgccggcgaggcaagcaccagatcgtaccgcatccacttgatggagatggtc
atcaacgccatctactacaactcagctctcagtcttcaagttatggaggccaaaggctgg
accaacaagttcttcagcacatggtttgccaacatcgacaacttcagacgtgtacacgat
aagaagctgtcaattgccgcaattagctcactgcttactctgaaggctgccgatgttccg
accctgcctgctgctctcaagcaacgtgaggatgctaccagggagtccgactttaccctc
gatgacgaggatgatgaggacgacgaggaaaacgactgggatggagatgttgagtgggac
gagaacgaggttgaagcagctctggaggaggacgatgtccccgacgagagtgccgcttac
ctcgacttcctcaaccaggaagcacaaaagttcggctcctacgccgatgatgacgatgat
gacatggacgaggaaagccttctggagacccctctggacaaggttgagccatatggcatg
ttcaagcatgtcctgctgagccttcagcaagaacagccccagctatacgagagtttgacc
aaggtcctcggccccgaagaacagcaggtcattcaaggcgtcttccacgaagccgacgcc
aaggccatggtcgccgctgccaacgcagaagctgccgccgccgcgggcatgcaggccaac
ggcaactaa
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