Penicillium digitatum: PDIP_66820
Help
Entry
PDIP_66820 CDS
T04849
Name
(RefSeq) Small nuclear ribonucleoprotein (LSM7), putative
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pdp
Penicillium digitatum
Pathway
pdp03018
RNA degradation
pdp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_66820
09123 Folding, sorting and degradation
03018 RNA degradation
PDIP_66820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_66820
03041 Spliceosome [BR:
pdp03041
]
PDIP_66820
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PDIP_66820
mRNA degradation factors
5'-3' decay
Lsm complex
PDIP_66820
Spliceosome [BR:
pdp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PDIP_66820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
FoP_duplication
DUF150_C
Motif
Other DBs
NCBI-GeneID:
26234998
NCBI-ProteinID:
XP_014530839
UniProt:
K9FL17
A0A7T6XIT1
LinkDB
All DBs
Position
Unknown
AA seq
125 aa
AA seq
DB search
MSERGSFRGGRGRGGRGGQGQQKSGGGGGAQEKPKKENILDLSKYMDKEVQVKFNGGREV
IGTLKGYDQLMNLVLDDVKETMRDEEGNTTTRSMGLIVARGTLIVLISPADGSEEIPNPF
LQAEE
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacgaggctcattccgaggcggtcgcggtcgtggaggccgcggcggacagggc
cagcagaaaagtggcggtggtggcggtgcacaggagaagcctaaaaaggaaaacatcttg
gatctcagcaagtacatggacaaggaagtccaagtgaagttcaatggtggtcgtgaggtc
atcggaaccctcaagggctacgatcagctgatgaacctggtcctcgacgacgtgaaagaa
accatgcgggatgaggagggcaacactaccacccgctcaatgggtctgatcgtcgcccgt
ggtactttgatcgtactgatctcccccgctgacggcagcgaggagatccccaaccctttc
ttgcaagcagaagagtaa
DBGET
integrated database retrieval system
