KEGG   Penicillium digitatum: PDIP_66930
Entry
PDIP_66930        CDS       T04849                                 
Name
(RefSeq) hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pdp  Penicillium digitatum
Pathway
pdp03020  RNA polymerase
pdp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PDIP_66930
  09124 Replication and repair
   03420 Nucleotide excision repair
    PDIP_66930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdp03021]
    PDIP_66930
   03400 DNA repair and recombination proteins [BR:pdp03400]
    PDIP_66930
Transcription machinery [BR:pdp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PDIP_66930
  RNA polymerase III system
   RNA polymerase III
     PDIP_66930
  RNA polymerase I system
   RNA polymerase I
     PDIP_66930
DNA repair and recombination proteins [BR:pdp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PDIP_66930
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat NA-iREase1
Other DBs
NCBI-GeneID: 26235009
NCBI-ProteinID: XP_014530850
UniProt: K9G282 A0A7T6XIW3
LinkDB
Position
Unknown
AA seq 234 aa
MDGDSAYSMEAEREMTRLWRTFRTVYELLADRGYEVSDNELVLPLEDFRAKYADPLGYPD
RTKMKIQARPTETMKLKYTALPSKANPNPQPDCGTIYVDFCPDSSGVGTKQVRAFNHLVD
ENNFHTGIFITQTPISPSAVRLLSGVPGRICEHFQEQDLLVNITRHELVPKHVLLSPEEK
GKLLERYRLKESQLPRIQISDPVARYLGLRRGQVVKIIRKSETAGRYASYRWVI
NT seq 705 nt   +upstreamnt  +downstreamnt
atggatggggattcggcatactccatggaggccgagcgcgagatgactcggctctggcgc
accttcagaacagtctatgaactgctcgctgaccggggctacgaagtgtctgataatgag
ctggtactcccgctagaagacttccgcgcaaaatatgctgaccctctgggctatcctgat
cgtaccaagatgaaaatccaagcccgccccaccgaaaccatgaagctgaagtacaccgca
ctgcccagcaaagcaaacccaaaccctcagccagactgcggcacaatctacgtcgacttc
tgccccgactcctcaggtgtcggaaccaagcaagtgcgcgccttcaatcaccttgtcgat
gagaacaacttccacactggtatctttatcactcagacgccgatctcgccttctgccgtg
cgcctgctttctggcgttcccggccgcatttgcgagcacttccaagaacaggatctgctt
gtcaacatcacccgccacgagctggtccctaagcacgtcctgcttagccccgaggagaag
ggcaagcttctcgagcgctaccgtctgaaggagtctcagcttccccgcatacagatctcc
gatcctgtcgctcgctaccttggcttgcgccgtggtcaggtcgtcaagattatccgcaag
tccgagactgcgggtcgttatgccagttaccgctgggtcatttaa

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