Penicillium digitatum: PDIP_67210
Help
Entry
PDIP_67210 CDS
T04849
Name
(RefSeq) TFIIH complex helicase Rad3, putative
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pdp
Penicillium digitatum
Pathway
pdp03022
Basal transcription factors
pdp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PDIP_67210
09124 Replication and repair
03420 Nucleotide excision repair
PDIP_67210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdp03021
]
PDIP_67210
03036 Chromosome and associated proteins [BR:
pdp03036
]
PDIP_67210
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_67210
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PDIP_67210
Transcription machinery [BR:
pdp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PDIP_67210
Chromosome and associated proteins [BR:
pdp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PDIP_67210
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PDIP_67210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
AAA_22
nSTAND3
AAA_11
Motif
Other DBs
NCBI-GeneID:
26235037
NCBI-ProteinID:
XP_014530878
UniProt:
K9FH71
A0A7T6XIU4
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MKFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ
QHYPEHRKLIYCSRTMSEIEKALAELKALMEHRAKELGHEEEFRALGLTSRKNLCLHPSV
KREKSGTVVDARCRSLTAGFVKEKKERGEDVELCVYHENLDLLEPHNLVPPGVFTLDGLA
RYGEEHKQCPYFSARRMMPWCNIIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDN
VCIESLSIDLSEDSLRKATRGANNLERRIEEMKSTDEEKLKNEYSKLVEGLQEAEKAREE
DQFISNPVLPDDLLKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVTHTISETPPSFLTHL
KDLTYIERKPLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLVATYDKGFVLILEPF
ESEAATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLGFTAVLQESY
SMTLARRSFLPMIVTRGSDQAQVSSSFGIRNDPGVVRNYGSLVTEFARITPDGVVVFFPS
YLYMESIISMWQGMGILDQIWNYKLILVETPDAQESSLALETYRTACCNGRGAILFCVAR
GKVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAIRHAA
QCLGRVLRGKDDYGVMVLADRRFERKRPQLPKWINQAMLDSETNLSTDMAVSNAKNFLRT
MAQPFKSKDQEGISTWGLADIERHEAKRRTEEERMMREVNDGHPIGGIIPSASLVVEDEY
DDNIDADLMMLDAP
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcttcatagatgatcttccggtgctgtttccatatcctcgcatctaccccgaa
caatatgcctacatgtgcgatctcaaaaagaccctcgacgcagggggtcactgtgtgctg
gaaatgccctcaggaactggcaagacagtttcgctactgtcgttgatcgtcgcctaccaa
cagcattatccagagcaccgtaagctcatctactgctcccgaaccatgtcggagatcgag
aaagcgttagcggagttgaaggctttgatggaacatcgtgctaaggagctgggtcatgag
gaggaattccgtgcgcttggcctaaccagtcggaagaatctttgtcttcatccttcggta
aagagagagaaaagcggtaccgtagttgatgctagatgcagaagcttgacggctgggttt
gtcaaggagaagaaggagcgcggtgaagatgttgagctttgcgtataccatgagaacctt
gacttgctcgaaccacataacctcgtcccccccggcgttttcacactcgacgggttggca
agatacggagaagagcataaacaatgtccctacttctccgctcgacgcatgatgccgtgg
tgcaatatcattatctattcctatcactatcttctcgatcctaaaattgcggaacgagtg
tcacgagagctctcaaaagattgcatcgtggtctttgacgaagcgcacaacattgacaac
gtctgtatcgaatcactcagtatagacctgagcgaggattctctacgaaaagcgactcgg
ggtgcaaacaatctggaacgcagaatcgaagaaatgaagagcacagatgaagaaaaactc
aagaacgaatactcaaaattagtggaggggctgcaggaagctgagaaggcccgggaagaa
gatcaatttatctcgaatccggtcttgccagatgatttactaaaggaagctgttcctggt
aacattcgccgggctgaacattttgtctcttttttgaagagattcatcgaatatctgaag
actcggatgaaggtcacccataccatttctgagacacctccttctttcctcactcacctg
aaagaccttacttatattgaacgaaagcctttgaggttttgtgccgagcgcttgacgtca
cttgtacggacgctggaacttgtcaacattgaagattatcagcctcttcaagaggtggca
acatttgcaacactggtcgcaacttatgataagggatttgttctcatccttgagcccttc
gagtccgaagcggctactgtaccgaatccgatcctccatttcacgtgcttggatgccgct
attgccatcaagccggtattcgatcgcttcagctctgtgatcattacctcgggaacattg
tcacccttagaaatgtatccgaaaatgctggggttcaccgctgttctgcaggaatcatac
agcatgacactcgctcggcgatctttcttgcccatgattgtcactcgaggctcagaccaa
gcacaggtttcatcttcgtttggaattcgcaacgaccccggtgttgtgcgaaactacgga
agcctagttaccgagtttgctcgcatcacacccgacggcgttgtcgttttcttcccctcc
tatctctacatggaatcaatcattagcatgtggcaaggtatgggcattctggatcaaatc
tggaactataaattgattctcgtggaaacccccgatgcacaagaatcatcactcgccctg
gagacttaccgaacagcttgttgcaacggacgtggcgcaatcttgttctgtgtcgctcga
ggcaaagtttccgagggtattgatttcgatcaccattacggtcgtgcagtgttgtgtatt
ggtgttcccttccaatacacagaatctcgaattctgaaagctcgtctcgagttcttgcgt
gagaattaccgcattcgggagaacgacttcttatctttcgacgctattcgacatgccgcc
cagtgtctgggtcgtgtcttgcgtggaaaagacgactacggagtcatggtgttggcagat
cgtcgattcgagcgaaagcgtcctcaactccccaagtggatcaaccaggcaatgttggac
agcgaaaccaatcttagcactgatatggctgtatcaaatgccaagaacttcttgcggacc
atggcccagccttttaaatcgaaagatcaagaaggcatttccacctggggcttggctgat
atcgagcgacatgaggcaaagaggaggaccgaggaagagcggatgatgagagaggtgaat
gacgggcacccaataggtggaattatcccgtctgcatccctggtcgtcgaggatgaatac
gacgataacattgatgcggacctcatgatgctcgatgcgccataa
DBGET
integrated database retrieval system
