Entry |
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Name |
(RefSeq) DNA-directed RNA polymerase
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KO |
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Organism |
pdp Penicillium digitatum
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:pdp00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PDIP_67230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pdp03021]
PDIP_67230
Enzymes [BR:pdp01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PDIP_67230
Transcription machinery [BR:pdp03021]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
PDIP_67230
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1673 aa
MATFARPVASTINGVDFNVYSEEEIKALSVKRIHNTPTLDSFNNPVPGGLQDPAMGAWGD
HVCTTCRQNSFTCTGHPGHIELPVPFYNVTFFDHIFRLLRAQCVYCLRLQMGRNQVNMYT
CKLRLLQYGLVDEVSIVDAMGAVKGAKSKATKDKEDDSDDSDDPDDDDYMQKRTDYVTRR
IREAKKEGKLDGLMPGGQNPIAAEARRELLKAFFKDINGFKKCVNCSGVSPAYKKDRYNK
IFRKQLPEKQKLAMLQGGFQAPNTMVLLDQERNSKSKNGFSEIHGAEEEIRRGVAVVQEV
QGSAGQEFMSSSEVYGALHLLFQKESEILQLVYNSRPVPKGVKVVSADMFFIKSLMVPPN
KYRPAVQQGAGTVMEAQQNTSFNAILKGCDTINQISKEIQNEEEKTMSRARNYSDLLQAI
VQLQDVVNGLIDRDRTSVTGSAAASQPNGIKQILEKKEGLFRKNMMGKRVNFAARSVISP
DPNIEPNEIGVPLVFAKKLTFPEPVTNHNFWELKEAVINGPDKYPGASSIENENGQVINL
KFKNLEERTALANQLLAPSNWRQKGSRNKKVYRHLTTGDYVLMNRQPTLHKPSIMGHKAR
VLPNERVIRMHYANCNTYNADFDGDEMNMHFPQNELAQAEARMLADADHQYLVATSGKPL
RGLIQDHISMGTWVTCRDSFYDEEDYHQLLYSCLRPEHSHIVTDRIQLVEPAMRKPKCLW
TGKQIITTILKNIQPPERGGLTLKSKSSTPGERWGEGNEEGEVIFQDGEYLCGILDKKQL
GPTAGGLIDAIHEVYGYSTAGKLIGVLGRLLTRVLNLRGFSCGIDDLRLTKEGDRIRKEK
LATAPQMGREVALKYVTLDKAPGDQTAELNRRLEEVLRDDDKQSGLDSVSNARSAKLSSE
ITSACLPYGLAKPFPWNQMQSMTISGAKGSGVNANLISCNLGQQVLEGRRVPLMISGKSL
PSFKAFETNPMAGGYVSGRFLTGIKPQEYYFHAMAGREGLIDTAVKTSRSGYLQRCLIKG
MEGLKAEYDSSVREASDGSIVQFLYGEDGLDITKQVHLNDFDFLAQNHISISKQVQADDY
HKLAKENVTTWHKDAMKAVRKTGKIDAVDPVLSHFPPGGNLGSTSEAFAQELKKYADVNK
NKLIKDKKKNIEGKITKKTFEALMNMKYMKSIIDPGEAVGIMAGQSVGEPSTQMTLNTFH
LAGHSAKNVTLGIPRLREIVMTASAKIMTPTMTLLLNEEISKDDSEKFAKAISKLSIAEL
VDKVQVKERIGSGIGHARAKIYDIDIDFFPSEEYTKEYAIETKDVLIALKSKLIPRLVRL
TKVELKKRNEEKKGVKGTTSQPEIGVSVGKIAEAPRGADSEAQPADDDNEDDEDDAKRAA
GAQNRGNQVSYEGPDAGEQDIIRRQDTPDEDEDEDESSKPANDTRDVQMKDGSDSDSDSE
DESDDETVHDSKACEEDVVGKFEEITKFKFDPKNGNTCSIQLQYDVETPKLLLLPLVEKV
LHLAVIQCIPGMGNCVFVEADEAKGDPANILTEGVNLLAMRDYQDIIKPHSIYTNSIHDM
LNLYGVEAARATIVREMDAVFKGHSISVDNRHLNLIGDVMTQSGGFKAFSRNGLVKDASS
AFARASFETTVGALKDVVLERGADNLKSPSSRIVVGRVGTVGTGSFDILAPVA |
NT seq |
5022 nt +upstreamnt +downstreamnt
atggcaacttttgcgcgcccggtcgcctcgaccattaatggggtcgacttcaatgtctac
tccgaggaagagatcaaagctctctcggtgaaaagaattcacaatactccgactttggat
tcatttaacaatcctgttcctggaggtcttcaagatcctgccatgggcgcttggggagat
catgtatgcacaacctgtcgccagaactctttcacttgtactggacaccctggacacatt
gagctaccagtacccttctataatgtcaccttcttcgatcacattttccgccttctccga
gcacaatgtgtgtactgtcttcgtctgcagatgggtcgcaaccaggtcaacatgtacacc
tgcaaattacgccttctgcaatatggcttggtcgacgaagtttctattgtcgatgcgatg
ggagctgtcaaaggagccaaatcaaaggccaccaaggacaaggaagacgactcggacgac
tcagacgatcccgatgatgatgactatatgcaaaagcggactgattatgtcactcggcgc
atccgcgaagccaagaaagagggaaaattggacggattgatgcctggcggacagaatcct
attgccgcagaagccagacgagagttgctcaaggcttttttcaaggatatcaatgggttc
aagaagtgtgtcaactgcagcggagtgtcccccgcttataaaaaggaccgctacaacaaa
attttccgaaagcaattacccgagaagcagaagcttgcgatgctgcaaggaggattccag
gcaccgaataccatggtccttctcgaccaagaaaggaactccaagtctaagaacggtttt
tctgagattcacggagccgaggaggaaattcgccgtggtgtggctgtcgtgcaggaggta
cagggatcggccggccaggaatttatgtcttcttccgaagtctatggagcacttcatctt
cttttccaaaaagaaagtgagatcctgcagcttgtgtacaactctcggccagtgcccaag
ggagtgaaagttgtgtcggcggacatgttcttcatcaaaagtcttatggtgccgccaaac
aagtaccggcccgcagtccagcaaggtgctggaacagtcatggaggcacagcagaacact
tcattcaatgcgattttgaagggctgtgacactatcaaccaaatcagtaaggagatccaa
aacgaggaagagaagaccatgtctcgggcacggaactacagtgatctccttcaagctatt
gttcagctccaagatgtggtcaacggtttgattgaccgcgatcgcacttcggtcaccggc
tcagctgccgcgtcacagcctaacggtatcaaacagattctcgagaagaaggaaggtttg
ttccgaaagaacatgatgggcaagcgtgtcaactttgctgctcgaagtgttatctcgccc
gatcccaacatcgaacccaatgagattggtgtaccccttgtcttcgccaagaagttgact
ttccctgaacctgtgacaaaccacaacttctgggagttgaaggaggctgttatcaacggt
cccgacaaataccccggcgcttcttcaatcgagaatgaaaatggacaagtaatcaacctc
aagtttaagaacttggaagagcgcacagcacttgccaaccaactgctcgcaccgtcaaat
tggcgccaaaaaggctcgcgtaacaagaaggtctaccgtcatctcaccactggtgattac
gtcttgatgaaccgtcagccaactctgcacaaaccctccatcatgggtcacaaggctcgt
gtccttcccaacgagcgggttattcgcatgcactacgccaattgtaacacctacaacgcc
gatttcgatggtgacgagatgaatatgcatttccctcaaaacgagcttgctcaagcggaa
gccagaatgctggcagatgccgaccaccagtacctcgttgcgacatcaggaaagccgctg
agaggtctaattcaagatcatatttccatgggaacgtgggtcacgtgccgtgacagcttc
tatgacgaggaggactatcaccagctgttgtacagttgcttgagaccagaacattcgcac
attgtcactgaccggatccagctggtcgagcccgccatgcgcaagcccaagtgcctatgg
actggaaagcagatcatcacaacaatccttaagaacatccagcccccagagcgaggaggg
ttgaccttgaagagtaagtcttctacccctggcgaacgatggggtgagggcaatgaagaa
ggagaagttatcttccaggatggagagtacctttgtggtatcctcgacaagaaacagctc
ggtcccaccgccggtggtctcatcgatgccatccatgaagtttatggatacagcactgct
ggtaagctcatcggtgttcttggaagactcctcactcgcgtcctgaatttgcggggtttc
agctgtggtatcgacgatcttcggttgaccaaggagggtgaccgtatccgcaaggagaag
ttagccactgctcctcagatgggtcgcgaagttgccttgaagtatgtgaccttggacaag
gctcctggtgaccaaactgctgagttgaaccgacgattggaagaggttcttcgtgatgac
gacaaacaaagtggcctggatagcgtttctaacgcccggtctgccaagctttcctctgaa
atcactagcgcctgtctcccgtacggccttgctaagcctttcccttggaatcaaatgcag
tctatgacgatatctggagcaaagggatccggtgttaatgccaacctgatttcttgtaat
ctcggccaacaggttcttgaaggtcgccgtgtaccactcatgatcagtggaaagagtctt
ccgtcattcaaagctttcgaaactaacccgatggcaggaggttacgtttctggtcgtttc
ttgaccggaatcaagcctcaggaatattacttccacgccatggctggtcgtgagggtctg
attgatactgctgtcaagacctctagatctggttacctgcaacgttgtttgattaagggc
atggaaggtcttaaggctgaatacgactcctctgtccgtgaagcgtcagatggctccatt
gtccagttcttgtacggagaggacggtctcgatatcaccaaacaggtgcacctgaacgac
tttgatttccttgcccagaaccacatctccatttccaagcaagtccaagcagatgattac
cacaaactggccaaggaaaacgtaactacttggcacaaggacgccatgaaggcggtccgc
aagaccggaaagattgatgctgtggaccctgtgttgtctcacttcccccctggaggaaac
ctcggaagtacatccgaagcgttcgcccaggagctaaagaagtatgcggacgtcaacaaa
aacaagctcatcaaagacaagaagaagaacatcgagggcaagattaccaagaagaccttc
gaagcactgatgaacatgaagtatatgaagtctatcattgaccccggtgaggctgtcgga
attatggccggtcaatccgtcggagaaccctccacacagatgactctcaacaccttccat
ttggctggtcactcggcaaagaacgtcacactaggtattccccgtctacgtgaaattgtt
atgactgcaagtgccaagattatgacacctacgatgactcttcttctgaacgaagagatt
tccaaggatgactcggagaaatttgccaaggctatcagcaaactgagtattgctgaactt
gttgacaaggtgcaagtcaaggaacgcattggctcgggcattggccacgccagggctaag
atctacgacatcgacattgactttttcccgtctgaagaatacactaaggaatacgccatt
gagaccaaggatgttctgattgctctgaaatccaagctcatccctcggttggtgagactc
accaaggtcgagctaaagaagcgcaacgaagagaagaagggcgttaagggcacaacttcc
cagcccgaaattggtgtttcggtcggtaaaatcgcggaggcaccaagaggcgccgactct
gaggcccagccagccgacgatgacaatgaagacgacgaggacgatgccaagcgggccgcc
ggagctcagaataggggcaaccaggtctcctacgaaggacccgacgccggcgagcaagat
atcatcagacgccaagatacccccgatgaagacgaagacgaagatgagagcagcaagcct
gccaacgacactcgcgacgtgcaaatgaaggacggctcggactcggactcggactccgaa
gatgagtctgacgatgagaccgtccacgacagcaaggcgtgcgaggaagatgtcgtgggc
aagttcgaggagatcacgaagttcaagttcgacccaaagaacggcaacacgtgctccatc
caactgcagtacgacgttgagacccccaaacttctcctccttcccctggttgaaaaagtt
ctgcacctcgctgtcatccagtgcatccccggcatgggcaactgtgtcttcgtcgaggcc
gatgaggcgaagggtgatcccgccaacatcctcactgagggtgtcaacctgctcgccatg
cgtgactatcaggatatcatcaagccccactcgatctacaccaactccatccacgacatg
ctcaacctgtacggtgttgaagctgctcgcgctactatcgtccgcgaaatggatgccgtt
ttcaaaggtcacagtatctccgttgacaaccgtcacttgaatttgatcggtgatgtgatg
acacagtccggtggcttcaaggccttcagtcgcaatggcttggtcaaggatgcctcatct
gccttcgcacgggccagtttcgagactaccgtcggcgctctgaaggacgttgtgctcgag
aggggtgccgataacctcaagagtcctagtagccgaattgttgttggccgtgtcggtacc
gttggcactggttcgttcgacattcttgctcccgtagcatag |