Penicillium digitatum: PDIP_68010
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Entry
PDIP_68010 CDS
T04849
Name
(RefSeq) SnoRNA binding protein, putative
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
pdp
Penicillium digitatum
Pathway
pdp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PDIP_68010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_68010
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PDIP_68010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
ANAPC4_WD40
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_VPS8
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
26235117
NCBI-ProteinID:
XP_014530958
UniProt:
K9FH24
A0A7T6XIH7
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MPSADNFDLPLAKRQKRVSQVKAGTRGSKIFAPFRTLGLVSPTPVPFTSVRLGKSTFQIT
TSVGHSLQTYDLRRGLNLIFLSRPQTPEIITATCAWQDKVFAAWGHLRSQSAGGVWVFKR
GKRVAVLEGPTDLKGPIERLVVFGSWVVGCWVGGLEVWKTGTYEHYASLRPQSARGSSGE
KIYTGIMCNMPTYLNKIFVGRSDGAVDIWNLRSGKLIHTLPSLSADSGPVTAIHPTPALS
LVAIAYKGGALAIQNVSSGQLVLSLKNASSRGLPVTSITFRGDGLGAGHDGRSSGVMATA
SSGSGDITLWDLNNGGRIAGILRGAHRMSSGEKPMGANRVEFLDGQPVLVSSGDDNSLKT
WIFDETPFSPIPRPLHRRNGHSAAVSALDFLPTSSDGSESGGKWLLSASKDCSLWGLSLR
KDSQHTEISQGSLERKAKKQGPSNISNTEDLKAPEVTCIACSLNRDGGMGVTTSGPIWSN
PKVTNADASNATGWESVVTGHRGDKFARTWFWGKKKAGRWAFATSDGTEVKSVAVSQCGT
FAVIGSAGGSIDMFNMQSGLHRQSFPARPPAGRATKSNAQTLIAAASKHTKAVTGLMIDS
LNRTVVSCGLDGKVKFWDLLSGKFIDELDWHPMAAITGLRYNKASELVAFSCDDLSIRVI
DLETRKLVREFWGCVGQVNDFIFSNDGRWIVAASMDSVVRVWDMPTGHLIDIFRVSSTCV
ALAMSSTGEFLATAHAGSIGISLWSNRSLFMPVSTKNLDENVIENVGLPATSGEGGAGLI
EAAFVNTTEQDEAEGPVLATEQLQHDMMTLSLVPKSRWQSLLHLDTIRERNRPTEAPKAP
EKAPFFLPSLLGSSGPEIVSEIPGTEDTDAGSVAKIAEAERLRIAKLQTGGNASGPQSIF
TRSLASGHDSSDFSSFIDHLKTLSPAKADLEIRSLDPRLRDGHSELSDFVIALTARLQSK
RDFELVHAWMAVFLKIHADTVSLSSTQDEPQYRLLQEALAIWSAEQQREGKRLAELVGYC
RGVVGFLRSAR
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagccgataatttcgatctgcctctcgcgaagaggcagaaacgagtatcgcag
gttaaggctggaacacgtggttctaaaatctttgctcctttccgtacactaggactagtg
tcgccaacacccgttcccttcacatcggtgcgcctaggtaaatcgacctttcaaatcacg
acttcagtggggcattcactgcagacttatgatttgcgccgaggcttgaatctcatcttt
ctgagtcgaccacaaacaccggagatcattaccgcaacatgtgcgtggcaggataaggtt
ttcgcagcttggggccatcttcggtcgcagtccgccggaggcgtctgggttttcaagcgt
ggcaaacgagttgcagtcctcgagggccccacagacttgaagggacccattgagcgcttg
gtagtgtttggttcgtgggtggttggttgctgggtcggtggcctcgaggtttggaaaacg
ggcacatacgagcactatgccagtctgcggccgcaatctgctcggggttcctctggagag
aagatctacaccgggataatgtgcaacatgccgacttatctgaacaagatattcgtgggc
cgatcggacggagcggttgacatctggaacctccgcagtgggaagcttattcacacattg
ccctctctgtcggcagattctgggcctgtaactgcgattcaccccacacctgctttatca
cttgttgccattgcctacaagggcggtgcgttggctattcagaacgtgagctcaggtcag
ctggtgttgtctctcaagaacgcatcgtcccgaggtctgccggtaacatcgattactttc
cgtggcgacggattgggtgctggccacgatggtcgcagctcaggtgtcatggccactgcg
tcaagtggtagcggcgacatcacgctttgggacttgaacaatggaggtcgaattgcaggt
atccttcgcggagcccaccgaatgtcaagtggcgaaaagcccatgggcgctaatcgtgtt
gagttcttggatggacagcccgtgctcgtgtcatcgggcgatgacaattctttgaagact
tggatcttcgacgaaacgccattttcgcccattcccagacctctccacagaagaaacgga
cactctgctgccgtcagcgctctcgatttcctgccgacgtcttcagatgggtccgagtct
ggcggcaagtggcttcttagtgcaagcaaggattgcagtctctggggacttagtctgcgc
aaagacagccagcataccgagatatcgcagggtagcttggaacgcaaggctaagaagcaa
gggccatcaaacatctcaaacacagaggatctcaaagctcccgaagtcacatgcattgcc
tgcagcctcaaccgtgatggcggaatgggagtcaccacctccggtccaatctggtcgaac
ccgaaggttacaaatgccgatgcttccaacgcaaccggctgggaaagcgtcgttactggt
catcggggcgacaagttcgcacgtacttggttctggggcaaaaagaaagctggtcgatgg
gcgtttgcaactagtgatggaacagaggtcaagagtgtggcggtttcacaatgtggtact
ttcgctgtcattggatcagctggaggttctatcgacatgttcaacatgcagtcaggtctg
caccgacaaagtttcccagctcgccccccagctggccgtgccactaaatccaacgctcag
accttgatcgccgcggcttctaaacacaccaaagctgtgactggcttgatgattgacagc
ttgaaccgtactgttgtcagctgtggtctggacggcaaagtcaagttttgggatcttctc
tctggaaaattcattgatgaactagactggcatcccatggctgccattactggacttcgc
tataacaaggcgagcgaattagtcgccttcagctgtgacgacctctcgatccgtgtgatt
gacctcgagaccagaaagctcgttcgtgagttctggggttgtgtgggtcaagtcaacgac
ttcatcttctcaaatgatggacgatggatcgttgctgcctccatggactcggtggtgcgc
gtatgggatatgcccaccgggcatctgattgacattttccgggtctcaagcacatgtgtc
gctctggccatgtcttcgactggtgaattccttgccaccgcacacgctggtagtatcggc
atcagcctttggagcaaccgaagccttttcatgcctgtgtcaaccaagaatctggacgaa
aacgttattgaaaacgttgggctccctgcaacatcaggagaaggcggtgctggtctgatt
gaagccgcctttgtgaatactacagagcaagatgaggcagagggtccagtactggcaaca
gaacaactacaacacgacatgatgactctgagtcttgtccccaaaagcagatggcagtca
ttgcttcacttggatactatccgggaacgtaatcgccctacggaagccccaaaggcacct
gaaaaggctccgttcttccttccctctctcctcggttccagtgggcccgagatcgtcagt
gaaattcccggcaccgaggataccgatgcgggatcggtggccaagatcgccgaagctgaa
agattgcggattgctaagttgcaaaccggtggaaacgccagtggtcctcaatccattttc
actcgatcattggcatccggccatgattccagtgacttcagctcatttatcgaccacctc
aagaccttatctccggccaaagcagatctcgagattcgttcactggatcctcgactacgt
gatggacactctgagttgtccgatttcgttattgccctgactgctcgcctgcagtccaag
agagactttgagcttgtccatgcgtggatggcggtctttttgaaaattcacgccgacact
gtgagtctcagctctactcaagatgaacctcagtatcgtctgttacaagaggctctagcg
atttggtctgccgagcaacagcgggagggaaagcgcctagctgagctggtgggttactgc
cgtggagttgttggattcttgcgatctgctcggtaa
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