Penicillium digitatum: PDIP_69160
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Entry
PDIP_69160 CDS
T04849
Name
(RefSeq) ATP-dependent RNA helicase, putative
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
pdp
Penicillium digitatum
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_69160
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PDIP_69160
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
90S particles
Helicases
PDIP_69160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ERCC3_RAD25_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
26235232
NCBI-ProteinID:
XP_014531073
UniProt:
K9FFI9
A0A7T6XIA1
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MPIAKKRKVAHAAPAAPVEESDVESNASSSSPQPTAKDADVEDGASDSNTQPTADDPNVD
GASSETEPSAPKTFKELGLIDSLCEACDKMGYKAPTPIQSESIPLALQGRDIIGLAETGS
GKTASFVLPILQALMEKPQPFFGLVMAPTRELAYQISLACESLGATINVRSTTLVGGMDM
VPQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKFLVMDEADRLLDMDFGPILDKIL
KVLPRERRTFLFSATLSSKVESLQRASLSNPARVSISSSKYATVETLQQTYILRPYKHKD
IYLVYLLHEFIGQSVIIFMRTVHETQRVAFLLRGLGFGAIPLHGQMSQSARLGALGKFRS
KSREILVATDVAARGLDIPSVDCVLNFDLPTDSKTYIHRVGRTARAGKSGTAISFVTQYD
VEIWQRIEAAMGKELAEFPAPKDEAMVFAEQVSASQRDAIQAMKHYDEKKGAKGKGKFSF
KGKRSRDAMDQEEG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgccgattgccaaaaagcgcaaggtcgcacacgcggcacctgctgcacctgttgaagaa
agcgacgttgaatcaaatgcaagctcttcaagcccccaacctaccgctaaggatgccgat
gtcgaagatggcgcgagcgattcaaacacccaacccaccgccgatgaccccaatgttgat
ggcgcttcctccgagactgaacccagcgctcccaaaacattcaaagaactgggtctgatc
gactcgctctgtgaggcctgtgacaaaatgggatacaaggctcctacaccaatccagtcc
gaatcaatcccgctggcacttcagggtcgtgatattattggattggctgaaacaggatct
ggaaagacagcctcatttgtactaccgattcttcaagcactcatggaaaaaccccagcct
ttctttggcctcgtaatggccccaacccgtgaactggcataccagatttcactagcgtgt
gagtctcttggtgcaacaattaacgtcagatccaccacattggtcggcggcatggacatg
gttcctcagtcaatcgctttgggaaagaaacctcacattatcgttgccacccccggtaga
cttctcgaccacctcgagaacacgaagggcttctccctccgcaacttgaaattcctcgtc
atggatgaagcagacagactcctcgatatggatttcggccctattctcgataagatcctg
aaggtcctgccgcgcgagcgcagaaccttcttattctccgccactctgagctcaaaggta
gaatctctccagcgagcctcgctttcaaatccggcccgcgtctcgatctcttccagcaag
tacgccaccgtggaaaccctccagcaaacctatatccttcgtccttataaacacaaggac
atctaccttgtttacctcctccacgaattcatcggccagtctgttattatctttatgcgc
accgttcatgagacgcagcgtgttgctttcctgctgcgcggtctaggctttggcgcaatc
cctctccatgggcagatgtctcaatccgctcgcctgggagcattgggaaaattccgatcg
aagagtcgtgaaatcctggtcgccactgatgttgccgctcgtggtttggacataccgtct
gtggactgcgttttgaattttgacttgccaaccgacagtaagacctatatccatcgggta
ggtcgtacagcacgtgccggaaagtctggaactgccatctcttttgtcacacaatatgat
gtagaaatttggcagcgcatagaggctgcaatgggcaaagagttggccgagtttcccgca
ccaaaagatgaggctatggtgtttgccgagcaagtgagtgcctcgcagcgtgacgccatc
caggcgatgaagcactacgacgagaaaaagggggccaaaggtaaaggaaagttctcattc
aagggtaagcgaagtcgcgatgccatggaccaggaagagggctag
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