Penicillium digitatum: PDIP_71020
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Entry
PDIP_71020 CDS
T04849
Name
(RefSeq) DNA topoisomerase
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pdp
Penicillium digitatum
Pathway
pdp03440
Homologous recombination
pdp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PDIP_71020
03460 Fanconi anemia pathway
PDIP_71020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdp03032
]
PDIP_71020
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_71020
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PDIP_71020
DNA replication proteins [BR:
pdp03032
]
Eukaryotic type
DNA Topoisomerases
PDIP_71020
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
PDIP_71020
FA (Fanconi anemia) pathway
PDIP_71020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
26235418
NCBI-ProteinID:
XP_014531259
UniProt:
K9G3X9
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MTSVVGHLTGLDFDRQYKGWMSCPPGSLFEAPVQEFVDKDKLPIADNIRNQAKYSKALFI
WTDCDREGEHIGSEVRSQALAGNSRIEVKRAKFSNTESAHVRRAALAPVNLDEYQASAVA
ARIELDLRIGAAFTRLQTLQLQTVVAALKEKVISYGSCQFPTLGFVVDRYLRVQNFKPET
FWGIKVILSREGKKVNFLWKRVHLFDRAVVTMMLERCLVAKQAKVTKVSQKPTSKWRPLP
LTTVDLQMMGSRFLRLDSQTIMKVAEALYTKGFISYPRTETDQFDKAIDLKKLIEKQYPD
SSWGQYARELVDGKFRTPRFGRHNDKAHPPIHPVSWVSPNQLNANEKKVYEFVVRRFLAC
CSDDAKGQGTEIEIQYGEESFHTNGLIVLERNYLDVYVYDKWESSQQIPNFERGELFEPT
EANIFEGKTTAPNYLTEPELIGLMDANGIGTDATMAEHIAKIKEREYVAINQRGSGRSAV
QEFIPTRLGIALVEGYDNVVEGLPNSVSLSKPFLRKEMELRMIEICSGTKTRQEVVQQSL
DMYREVFIHTQRRINMLKNACRKYLVEETTS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgtggtgggccatctgactggcttggactttgaccgccagtacaaaggctgg
atgtcctgtcctccagggtcactatttgaggctcctgtacaagagtttgttgataaggac
aagctcccaattgcggataacatccggaaccaagccaagtactctaaggccctgtttatt
tggaccgattgtgatcgcgaaggtgagcatattggttctgaggtccgtagtcaagcatta
gcaggcaattctcggatcgaggttaaacgagctaagttcagcaacacagaaagcgcacat
gttcgtcgggctgctctagcaccagtcaatctcgatgaatatcaggccagtgctgtagct
gcaagaatcgagctggatcttcgaattggcgctgcattcacccgcctacagactctacaa
ctacaaacagtagtggcagccttgaaggaaaaggtcattagctatgggtcctgccaattt
cctactttgggattcgttgtcgatagatacttaagagtccaaaatttcaagccagaaacg
ttttggggcatcaaggtcatactcagccgtgaaggcaaaaaggtcaactttctctggaag
cgggtgcatttatttgaccgagctgttgtgacgatgatgctggagcggtgtttggttgca
aagcaagccaaagtcacgaaagtgagccagaagcctacaagcaaatggcggccgttgccc
ttgactacggtagacctacagatgatgggcagtcgatttcttcgtttggacagtcagact
atcatgaaggtagcggaagcactttacaccaaaggatttatcagctatcccagaaccgag
acagaccagttcgacaaagcaattgaccttaaaaaattgatcgaaaagcaataccccgac
agctcatggggtcaatatgctcgagaactcgttgatggcaagttcaggacccctcgcttt
ggccgccacaatgataaggcccacccacctattcatcctgtcagctgggtctcaccgaat
caattgaatgccaatgaaaagaaggtctatgaatttgttgtccgtcgattcctcgcctgc
tgttctgatgacgcaaagggccagggcacagagattgaaattcaatatggcgaagaatcc
ttccacacgaatggtctgatcgtgttggagagaaactacttggatgtatacgtctacgat
aagtgggaaagcagccagcaaattccaaactttgaacgaggagagctcttcgagcccaca
gaagccaatattttcgaaggcaaaacaactgctcccaactatctgaccgagcctgagctt
attggcctgatggatgccaacgggattggtactgatgccacgatggcggagcatattgcc
aagatcaaagaacgtgaatacgtcgccataaaccaacgaggcagtggccgcagcgcagtg
caggaattcatcccgacccgtttgggtattgcccttgtggaagggtatgataatgttgtc
gaaggtctccctaatagtgtgtctctcagcaagccgttccttcgtaaggagatggagttg
agaatgattgagatctgctcgggcactaaaactcgacaagaggtcgtccagcagagtctg
gacatgtaccgagaagtcttcattcatacacagagacggatcaacatgctgaagaatgcc
tgtcgcaagtatcttgttgaagaaaccacgtcatga
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