Penicillium digitatum: PDIP_71360
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Entry
PDIP_71360 CDS
T04849
Name
(RefSeq) ATP-depentend DNA helicase, putative
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdp
Penicillium digitatum
Pathway
pdp03420
Nucleotide excision repair
pdp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PDIP_71360
03430 Mismatch repair
PDIP_71360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_71360
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PDIP_71360
DNA repair and recombination proteins [BR:
pdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PDIP_71360
MMR (mismatch excision repair)
Other MMR factors
PDIP_71360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
AAA_11
AAA_22
ADDB_N
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
26235452
NCBI-ProteinID:
XP_014531293
UniProt:
K9G3P1
A0A7T6XHZ2
LinkDB
All DBs
Position
Unknown
AA seq
995 aa
AA seq
DB search
MDPILDGLNHAQREAVTSSGSILQVLAPPGSGKTKTLTARVAYLLSHHGYQPHDVICCTF
TIKASREMRERLAKLIGEKLESRLILGTFHSICRRYLVKYGYLIGLRKGFGIADSDDTRA
ILRRTIKRLKSSIEVKAAQGRISRHKAHGLGPDALADRAKAEEIELVEIYRAYESALAAS
NLLDYDDLLLRCGDLLRDHPQCVSNVQAVLVDEFQDTNVIQYELMNLFASKNRRITVVGD
PDQSIYGFRSAEIQNLKRMQRRYSNTTVVLLEDNYRSAGSILNAAQEVIEQDTSRPAKAL
LATHSFGTLPVLRRLPTPSAEAQWMVLEIKRCAAMTGGLLRMSDFAVLLRSASLSTQIET
AFGRAGIPYKMVGGRKFFDRTEVKILLNYMRVVGHTGHSDALINIVNVPPRRIGDETIKQ
LTSGAEKAKIPLWDYIKDVIQGRRSTEKKLQKAAEQGLCFLVKLIEASRQKLQECEDASA
PRVLIEFIAERLSFQEYLIRTYPLDEDSRWANVKELMHQANEVAAFEGEEVDKEMDLPEI
EGVQQQHAHPGEEALTRFLANVALATEITTKEETKDGDQPSEKVTISTIHAAKGLEWPVV
FVPAVYNGSIPHSRAEVVEEERRLLYVAMTRAQALLYLSVPIRQPRLGEGEDSATTVTPF
LPPKLTKTRFRPTGPSLHEKVVYAIADILRRPRPSLDDIYQGLEFLPSTLDDRWTAEGEE
DRSTFDDTTNSHDTSGEPNPKRRRSDMNQGPKPTTYISSTGYTMNNSTGFTIPTTVSSGF
TSARDYIAAKPEPSAESASKPPAHAEADAAGASKVKPLSSASRKDGLTQASISNFFAGPG
SQKREPVQSSYPQPPPSHRYEGLPSQHQRSGASIVPSTLSSHRVQPRPLVPTRPTLDPTN
LNGYTWLAAPSKPTLKPTRIPMTQEQSGNATSLGGTAGPDEVKPGRSTRGFQPVSTFHNT
TMSMVQQAPRRTLGIRRSMNGWQDRMKRQGGGQAS
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggatccgattttagatggcttgaatcatgcccagcgagaagctgtcacttcatccggc
tcgatcttacaagtgctcgcacccccgggctcaggtaagacaaaaacattgactgcacgc
gtcgcgtacctcctctcacaccacggataccaaccacacgatgttatctgctgcacattt
actatcaaagctagccgcgaaatgcgggagcggctcgcaaagctcattggagaaaagctc
gaatcacgcttgattctgggcactttccattccatctgtcgccgctacttggttaagtac
ggatacttgatcggcctgcggaaggggtttggcattgcggattcggatgatacccgcgca
attctcagaagaaccattaaacgactgaagtctagcatcgaagtcaaggcggcgcaaggc
cgaatttctcgacataaagcacatggactcggccctgatgccttggcggatagagccaaa
gcagaggagatagagctagttgagatctatcgtgcctatgaatcagcactggcggcctcc
aatctcttggactatgatgacctccttctgcgatgcggagatctgctccgggaccaccca
caatgtgtctcaaatgtgcaggctgtcttggtggatgaattccaggacaccaacgtcata
caatatgaactgatgaatctattcgcatctaagaaccgacggatcaccgtcgtcggagat
ccagatcaaagcatctacggatttcgttctgcggagatccagaatctcaagcggatgcag
cggcgatattcaaacacgacggttgtacttttggaagataattaccgttctgcggggtct
atcctgaatgcagcccaggaagtgattgagcaggatacgagtcggcctgcaaaagcacta
ctagctacgcactctttcggaaccttgcccgtgctaagaagacttccaactcccagcgca
gaagcgcagtggatggtacttgagatcaagcgatgtgcagcgatgaccggcggtctattg
cgcatgtctgactttgctgttttgcttcggtcagcttcgctttctacacaaatcgagacg
gccttcggaagagccggtataccatacaagatggttgggggacgaaagttctttgatcga
actgaagtgaaaattcttctcaattatatgagggttgtgggtcatacgggacattcggac
gcgttgataaatattgtgaatgttccgccacgaaggattggcgatgagacaatcaagcaa
ttaactagtggtgcggagaaggccaagattccactgtgggactacatcaaggatgtcatt
caagggcgccgttcaactgagaagaaactgcaaaaggccgcagagcagggactttgcttt
ttggtcaagttgattgaagcctctagacagaagctgcaagagtgtgaggatgcatccgct
ccacgtgttctgattgaattcattgccgaacgtctctcgttccaggagtatctcatcaga
acctacccccttgatgaagacagtcgctgggctaatgttaaagaactgatgcatcaagcc
aatgaagttgcggcgtttgaaggggaagaggttgacaaagaaatggatctccccgaaatc
gaaggtgtgcagcaacagcatgcgcatcctggcgaggaggctctgactcgtttcctggca
aatgtagccttggctacagagatcacaaccaaagaagaaaccaaggacggagaccagccg
tcagagaaagtcaccatttccactatccacgctgccaagggcttggaatggccagtcgtg
tttgttcccgcagtgtacaacgggagcattccccattcgcgtgcagaggtggtagaagaa
gagagacgattgctctatgtcgcaatgacaagagcacaggccttgctatacctgagtgtt
cctattcgacaaccccggctaggagaaggagaagatagtgccaccacggtgacgccattc
cttcctcccaagttgaccaaaacgcgatttcggccaacggggccgtctcttcatgagaag
gtggtgtatgcaatcgccgatatcttgcgtcgacctcggccatctttagacgacatctac
cagggactcgagtttcttccatcgacactggatgaccgatggacagccgagggtgaggaa
gaccgcagcacattcgatgacacaactaactctcatgacacctctggcgagcccaatcca
aagcgacggcggtcggacatgaatcaggggcccaaaccaactacgtacatctcatcgacc
gggtataccatgaacaactcgacagggtttactattcctacaaccgtttcatcgggtttt
acgtctgccagggattacatagcggccaagcccgaaccctccgcagagtcagcctcaaag
cctccggcgcatgccgaggcagatgcagctggggcaagcaaagtgaaacctctcagcagc
gctagccgtaaagacggactcacacaagcaagcatatccaacttctttgcaggcccagga
tcccagaagagggaaccagttcagtccagctatcctcagccaccaccatcccacagatat
gaagggctaccgtcgcaacaccaacgctcaggggcaagcatcgtaccatctactctatcc
tcgcaccgtgttcagcctcggccacttgttccaacacggccgaccctagatcctacaaat
ctcaatggctacacgtggctggcagctccatccaaaccaactctgaaacctaccaggatt
ccgatgacgcaggaacagagcggcaacgcgacttccttaggcggaacagccgggccagac
gaggtgaaacccggacgctccacccgcgggttccagccggtatcgacgttccacaacacg
acgatgtcaatggttcaacaagcaccacggcggacgttgggaattcgacggagcatgaat
gggtggcaagatcggatgaagcgacagggcggtgggcaggcgagctga
DBGET
integrated database retrieval system
