KEGG   Penicillium digitatum: PDIP_71680
Entry
PDIP_71680        CDS       T04849                                 
Name
(RefSeq) WD repeat protein
  KO
K10570  DNA excision repair protein ERCC-8
Organism
pdp  Penicillium digitatum
Pathway
pdp03420  Nucleotide excision repair
pdp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    PDIP_71680
  09124 Replication and repair
   03420 Nucleotide excision repair
    PDIP_71680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pdp04121]
    PDIP_71680
   03400 DNA repair and recombination proteins [BR:pdp03400]
    PDIP_71680
Ubiquitin system [BR:pdp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     PDIP_71680
DNA repair and recombination proteins [BR:pdp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      PDIP_71680
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 NBCH_WD40 WDR55 WDR90_beta-prop_4th Beta-prop_SCAP WD_LRWD1 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 26235484
NCBI-ProteinID: XP_014531325
UniProt: K9FEF9 A0A7T7BIW0
LinkDB
Position
Unknown
AA seq 491 aa
MNSYLLNRALGSVTPNEFHVAQTTRLVHNLEPAPGIRFSSHRATAPTDQSEDDVAPLDQE
LGATTEVFSHKSGVNCLAMDQFEGRYMISGGADPSIHLWDLESRGSELKHVHQSCASVSK
SSHPDAHTHAITSLSIYPFDPIPSTIFSTAHDGTLKLSALQSPSITPLHTFNLDCTPYSH
SFSSQPGSTLLVAVGTSERSVRLVDLRSGLSTQGLPGHNGAVLSVAWAPHRPHLLASASV
DNRVIIFDVRRGGHNSAIATLDMDDPVGLVVPGTGSAPVSYENRPAFSRHARAHNGPVTG
VRWTCNGSHIVTTGQDSRIRVWDSATGANALVHFGPRVRNSSSSHLAERAPLIVPRGSMN
PGHETLLWPNFNEHDDRGEIFMFELREGTFVKRLRVPGLMAGSQNVRGRSSALSAGRIND
LVWRGNGASGEGIELFSAHGDGTIRTWVSHEPDGEPTETEEAAQADRKRKRDVLDKIYQG
FLEPGQPSLRI
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgaattcctatctcctcaacagagcccttgggtctgtgactccaaatgaattccatgtt
gctcaaacaacccggctagtgcacaaccttgagcccgctcccggcatacggttctccagc
cacagagcaactgcgccaacggaccagtccgaagacgatgttgcacctttagatcaagag
ctaggtgctacgacggaggtattttctcacaagtctggcgtgaattgtctggcaatggat
cagtttgagggccgatacatgatatcgggaggtgcggatccatcgatccatctgtgggac
cttgaatcaagaggttcagaactcaaacatgttcatcaatcttgcgcgtccgtcagcaaa
tcctctcaccctgacgcgcatacacatgcgatcacctccctctcgatctacccgtttgat
cccatcccgtcaacgatcttctcgacggcacacgatggtacattaaaactgtcggcgcta
cagtcaccctctattacccccctccacacattcaacctggattgtacaccatattcacac
tcgttctcctctcagcctgggtcaacactgctcgtcgcagtaggcacgtctgagcggtcg
gtccgactagtagatctacgatctggattatcgacacaaggtttaccggggcacaatggc
gcagtcttatcagtagcatgggcacctcaccggccacatctcctagcctctgcatcggtc
gacaaccgagtaatcattttcgatgtgcgtcggggaggtcacaactctgccatcgctacc
ctggacatggatgatccagtgggactagtggtaccaggaactggatctgcaccggtctca
tacgagaatcgtccagccttctcccggcatgctcgtgcacacaacgggcctgtgaccgga
gtgcggtggacctgtaatggcagccacatcgtgacaacaggacaggattcccgaattcga
gtctgggactcggcaacaggcgccaatgcacttgttcatttcggccctcgggtccgtaat
agctcctcctcgcatctggctgaacgggcacccttaattgtgccgagaggctccatgaat
cctggacatgaaacactactgtggccgaatttcaatgaacatgatgatcgtggtgagata
ttcatgttcgagctccgcgaaggcacatttgttaagcgtctccgcgtcccgggtctcatg
gctgggtcgcagaatgtccgtggtcggtcaagtgccttgagcgctgggcgtatcaacgat
ctggtctggcgagggaatggtgcatcgggagaggggatagagctgttctctgctcacggc
gatggaacaatccgcacatgggtctctcacgaaccggacggcgaacccactgaaaccgag
gaagcagctcaggccgatcgcaagcggaagcgagatgttctcgacaagatctatcaagga
tttctcgagcctggccagcccagtctacgaatctaa

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