Penicillium digitatum: PDIP_71680
Help
Entry
PDIP_71680 CDS
T04849
Name
(RefSeq) WD repeat protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
pdp
Penicillium digitatum
Pathway
pdp03420
Nucleotide excision repair
pdp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PDIP_71680
09124 Replication and repair
03420 Nucleotide excision repair
PDIP_71680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdp04121
]
PDIP_71680
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_71680
Ubiquitin system [BR:
pdp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
PDIP_71680
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
PDIP_71680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
NBCH_WD40
WDR55
WDR90_beta-prop_4th
Beta-prop_SCAP
WD_LRWD1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
26235484
NCBI-ProteinID:
XP_014531325
UniProt:
K9FEF9
A0A7T7BIW0
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MNSYLLNRALGSVTPNEFHVAQTTRLVHNLEPAPGIRFSSHRATAPTDQSEDDVAPLDQE
LGATTEVFSHKSGVNCLAMDQFEGRYMISGGADPSIHLWDLESRGSELKHVHQSCASVSK
SSHPDAHTHAITSLSIYPFDPIPSTIFSTAHDGTLKLSALQSPSITPLHTFNLDCTPYSH
SFSSQPGSTLLVAVGTSERSVRLVDLRSGLSTQGLPGHNGAVLSVAWAPHRPHLLASASV
DNRVIIFDVRRGGHNSAIATLDMDDPVGLVVPGTGSAPVSYENRPAFSRHARAHNGPVTG
VRWTCNGSHIVTTGQDSRIRVWDSATGANALVHFGPRVRNSSSSHLAERAPLIVPRGSMN
PGHETLLWPNFNEHDDRGEIFMFELREGTFVKRLRVPGLMAGSQNVRGRSSALSAGRIND
LVWRGNGASGEGIELFSAHGDGTIRTWVSHEPDGEPTETEEAAQADRKRKRDVLDKIYQG
FLEPGQPSLRI
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctatctcctcaacagagcccttgggtctgtgactccaaatgaattccatgtt
gctcaaacaacccggctagtgcacaaccttgagcccgctcccggcatacggttctccagc
cacagagcaactgcgccaacggaccagtccgaagacgatgttgcacctttagatcaagag
ctaggtgctacgacggaggtattttctcacaagtctggcgtgaattgtctggcaatggat
cagtttgagggccgatacatgatatcgggaggtgcggatccatcgatccatctgtgggac
cttgaatcaagaggttcagaactcaaacatgttcatcaatcttgcgcgtccgtcagcaaa
tcctctcaccctgacgcgcatacacatgcgatcacctccctctcgatctacccgtttgat
cccatcccgtcaacgatcttctcgacggcacacgatggtacattaaaactgtcggcgcta
cagtcaccctctattacccccctccacacattcaacctggattgtacaccatattcacac
tcgttctcctctcagcctgggtcaacactgctcgtcgcagtaggcacgtctgagcggtcg
gtccgactagtagatctacgatctggattatcgacacaaggtttaccggggcacaatggc
gcagtcttatcagtagcatgggcacctcaccggccacatctcctagcctctgcatcggtc
gacaaccgagtaatcattttcgatgtgcgtcggggaggtcacaactctgccatcgctacc
ctggacatggatgatccagtgggactagtggtaccaggaactggatctgcaccggtctca
tacgagaatcgtccagccttctcccggcatgctcgtgcacacaacgggcctgtgaccgga
gtgcggtggacctgtaatggcagccacatcgtgacaacaggacaggattcccgaattcga
gtctgggactcggcaacaggcgccaatgcacttgttcatttcggccctcgggtccgtaat
agctcctcctcgcatctggctgaacgggcacccttaattgtgccgagaggctccatgaat
cctggacatgaaacactactgtggccgaatttcaatgaacatgatgatcgtggtgagata
ttcatgttcgagctccgcgaaggcacatttgttaagcgtctccgcgtcccgggtctcatg
gctgggtcgcagaatgtccgtggtcggtcaagtgccttgagcgctgggcgtatcaacgat
ctggtctggcgagggaatggtgcatcgggagaggggatagagctgttctctgctcacggc
gatggaacaatccgcacatgggtctctcacgaaccggacggcgaacccactgaaaccgag
gaagcagctcaggccgatcgcaagcggaagcgagatgttctcgacaagatctatcaagga
tttctcgagcctggccagcccagtctacgaatctaa
DBGET
integrated database retrieval system