Penicillium digitatum: PDIP_72120
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Entry
PDIP_72120 CDS
T04849
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
pdp
Penicillium digitatum
Pathway
pdp03013
Nucleocytoplasmic transport
pdp03015
mRNA surveillance pathway
pdp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_72120
09122 Translation
03013 Nucleocytoplasmic transport
PDIP_72120
03015 mRNA surveillance pathway
PDIP_72120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_72120
03041 Spliceosome [BR:
pdp03041
]
PDIP_72120
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PDIP_72120
Spliceosome [BR:
pdp03041
]
Complex C
Other components
EJC/TREX
PDIP_72120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_3
HMA
Motif
Other DBs
NCBI-GeneID:
26235528
NCBI-ProteinID:
XP_014531369
UniProt:
K9FF71
A0A7T7BIU6
LinkDB
All DBs
Position
Unknown
AA seq
158 aa
AA seq
DB search
MSTEMEIDPPVAHDGDAPEQSDRSFEPRTQGNAVAVRSIEGWIIIVSNIHEESSEEDVTE
LFAEYGEIKNFSLNLDRRTGYVKGYALIEYSTLPEASEAIQNLNGYKLLEQTLHVDYAFV
RPPPSGKNKNGGPKGRAIRNRSRSPNRSRSPEAGGDRD
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgagatggaaattgaccctcctgtcgcacacgacggcgacgctcccgagcag
tcggaccgtagctttgagccacgcacccaagggaacgcggtcgccgtgcgcagcatcgaa
gggtggattatcatcgtttctaatatccacgaggaatcatcggaggaggatgtaactgaa
ctctttgcggagtatggtgagatcaaaaacttcagcttgaaccttgatcggcgaacgggt
tatgtcaagggctacgcattgatcgaatactccactctccccgaggccagtgaagctatc
cagaaccttaacggttacaagctcctcgaacagacgcttcacgtcgactatgcttttgtc
cgtccacccccatcaggcaagaacaagaacggagggccaaagggccgagctattcggaat
cgtagcagaagccccaaccggagtcgcagccccgaagctggcggcgaccgggactaa
DBGET
integrated database retrieval system