Entry
Name
(RefSeq) hypothetical protein
KO
Organism
pdp Penicillium digitatum
Pathway
Brite
KEGG Orthology (KO) [BR:pdp00001 ]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_72120
09122 Translation
03013 Nucleocytoplasmic transport
PDIP_72120
03015 mRNA surveillance pathway
PDIP_72120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pdp03019 ]
PDIP_72120
03041 Spliceosome [BR:pdp03041 ]
PDIP_72120
Messenger RNA biogenesis [BR:pdp03019 ]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PDIP_72120
Spliceosome [BR:pdp03041 ]
Complex C
Other components
EJC/TREX
PDIP_72120
BRITE hierarchy
SSDB
Ortholog Paralog GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
Unknown
AA seq
158 aa AA seq DB search
MSTEMEIDPPVAHDGDAPEQSDRSFEPRTQGNAVAVRSIEGWIIIVSNIHEESSEEDVTE
LFAEYGEIKNFSLNLDRRTGYVKGYALIEYSTLPEASEAIQNLNGYKLLEQTLHVDYAFV
RPPPSGKNKNGGPKGRAIRNRSRSPNRSRSPEAGGDRD
NT seq
477 nt NT seq +upstream nt +downstream nt
atgtcgaccgagatggaaattgaccctcctgtcgcacacgacggcgacgctcccgagcag
tcggaccgtagctttgagccacgcacccaagggaacgcggtcgccgtgcgcagcatcgaa
gggtggattatcatcgtttctaatatccacgaggaatcatcggaggaggatgtaactgaa
ctctttgcggagtatggtgagatcaaaaacttcagcttgaaccttgatcggcgaacgggt
tatgtcaagggctacgcattgatcgaatactccactctccccgaggccagtgaagctatc
cagaaccttaacggttacaagctcctcgaacagacgcttcacgtcgactatgcttttgtc
cgtccacccccatcaggcaagaacaagaacggagggccaaagggccgagctattcggaat
cgtagcagaagccccaaccggagtcgcagccccgaagctggcggcgaccgggactaa