Penicillium digitatum: PDIP_72190
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Entry
PDIP_72190 CDS
T04849
Name
(RefSeq) Nucleoporin Nsp1, putative
KO
K14306
nuclear pore complex protein Nup62
Organism
pdp
Penicillium digitatum
Pathway
pdp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PDIP_72190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_72190
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PDIP_72190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
ATG17_like
DUF16
DUF4200
COG4_N
Tuftelin_like
ParB
Motif
Other DBs
NCBI-GeneID:
26235535
NCBI-ProteinID:
XP_014531376
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MAFSFGTPASTGASSGSIFGTAGNTFGANKDNNASSGGLFGNVGASSTGNSASPSMFGGN
AASGQSTPTFGNVGASNATNGGTSAFSFGGKAPSGTGTQPNTLFGAAASSQTPNKSTEST
TPASNALFGGAGTKSFFNTAAPTATPAPTGGALFGNNSTTPAGPPPASNPPSSSFGAAKT
GVSTTPTTAPSSTTPATSQTQPSSNMFGGGATKPLFGGGATAAVPGGGLFSVNKPAESTT
PKTAAGTISKPLFGAAAPAAGVQSSQAPSLFSNTATPSGDSGSKSAFPALGAPASTANQT
LSLGALATSSATPQKSLFPSTGSATSTAATSTTPATAPLGGGPFGASAPSTTPGTAATAA
PATTTPAAPTGGLFGQAATTTSTQPATSASSTSISGLGSQPTAASTTAAAGAAPAGPSSL
GQSTTGPAPPAQSRLKNKTMDEIITRWATDLGKYQKDFRDQAEKVSEWDRLLVENGTKVQ
KLYGSTVDADRATQEVERQLSAVEGQQDELSSWLDRYEREVDEMVTKQVGPGESLQGPDQ
ERETTYKLAEKLSERLDEMGKDLTSMIEEVNGASSTLTMTNKADEPISQIVRILNAHLSQ
LQIIDQGTSDLQSKVVAAQKAGQSISARLGYGYPNNGMGNNNTADDFYRSFMQGR
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctctttcggcaccccagcctccaccggcgcctctagtggaagtattttcggc
acagcgggcaatacgtttggcgccaacaaggataacaatgcgtctagtggtggcctcttc
ggtaatgttggagcttcgtccaccggcaacagcgcatcgccgtcaatgtttggaggaaat
gcagcaagtggccaaagcacaccaaccttcggcaatgtaggcgcttccaatgcgaccaac
ggcggtacttcggccttcagcttcggcggcaaggctccatccggaactggcacgcagccc
aacacactctttggcgccgctgccagcagccaaactcctaacaagtctacggaatcgacc
acacctgccagcaatgcgctgttcggtggcgcaggtacgaagagctttttcaacaccgcg
gccccaacagctacccctgctcccacgggaggcgctttgtttggcaacaactccactacc
cctgctggtcccccgcctgcatcgaacccacccagcagctcattcggtgctgcgaaaacc
ggagtctcgactacccctaccacagcgccgtcatctacaacacctgctacctcacagacg
cagccatctagcaatatgtttggaggaggagcaaccaagccgctgtttggaggtggagca
actgctgctgtgcccggtggcggcttattcagtgtaaacaagccggccgaatcaactact
cctaagactgctgcagggaccatttccaagccactattcggtgcagctgcacccgcggct
ggtgtgcaaagctcgcaggcaccgtctctgttcagcaatacggctactcccagtggcgac
tccggttcgaagtctgcattcccggccctcggcgctcctgcctccaccgcaaatcaaact
ctctcactaggagccctcgctacgtcgagtgctacccctcaaaagtctcttttcccttcc
accggaagtgctacatctacagctgctacctctactactccggctacggctccccttgga
ggaggcccattcggggcctcagctccctccactactccaggtactgcggctactgccgca
cctgctaccactacacctgctgcacctacgggcggcttgttcggccaagctgctactacc
acttcgactcaaccagcaacctccgccagttcaacatctatttctggtcttggtagtcaa
cccaccgctgcttcgactacagccgctgccggtgctgctccagctggtccctcctccctt
ggacagtctaccacggggcccgctcctccagcccagtcacgtctgaagaacaaaaccatg
gatgaaatcatcacccgatgggccacagatctcggcaaatatcaaaaggacttccgtgat
caggcggagaaggtttccgagtgggaccgtttgctcgtggagaatggtaccaaagttcag
aagctgtacggcagcactgttgatgcggatcgagctacccaggaggtggagcgccaattg
tcagcggtcgaaggccaacaggacgagctcagctcatggctggatcgatacgagcgtgaa
gtcgatgaaatggtcaccaagcaggtgggccctggagagtcccttcaaggacctgaccag
gagcgcgagacaacttacaaactggccgagaagctctcggaacgcttggacgaaatgggc
aaggatcttaccagcatgattgaagaggtcaacggtgcttcatctacattaaccatgacc
aacaaggcagatgaaccaatctcgcagattgtccgcattctcaacgcacacctgtcccag
ctgcagatcatcgaccaaggcacctcggacctgcagtccaaggttgtcgccgcccaaaaa
gctggccaatcgatctctgcccgtctcggatacggctatcccaacaatggtatgggcaac
aacaacaccgctgatgatttctaccgctcgttcatgcaaggacggtaa
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