Penicillium digitatum: PDIP_72560
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Entry
PDIP_72560 CDS
T04849
Name
(RefSeq) DEAD/DEAH box helicase, putative
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
pdp
Penicillium digitatum
Pathway
pdp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_72560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdp03041
]
PDIP_72560
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PDIP_72560
Spliceosome [BR:
pdp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PDIP_72560
Complex C
U5 SnRNP specific factors
PDIP_72560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
DUF3334
PRAI
Motif
Other DBs
NCBI-GeneID:
26235572
NCBI-ProteinID:
XP_014531413
UniProt:
K9FEL9
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MTNSSELFPPLPPPDPVERPPSPPPPPPEDLATPPPPPDNIAPPPPPDDVPPPPPVETQK
KQKLGWGAKKLAVTPLTQREKLALEKRAQEVEAERQAKARANGTDHSGFTFEPPSVRSQA
SRNIREESFRHVPTGPRAMRDEPPAGPGGMRKGGRQHTQYNRDQDMPPPSSKTKGEKRLT
EEDEAAALATLTKHRYMGADQTSNFSAKKKRKRTADRKFNFEWNTEEDTSGDYNPLYQKR
QEANFFGRGRLAGFGDDVADDVARKYAEALAARDHEAGSARAKQMLEMERRRREDSTRTQ
IDKHWSEKRLDLMRERDWRIFKEDFNIATKGGSVPNPMRSWEESHLPKRLLELVDRVGYK
DPTAIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLVYISALPRLDENEWRKNDGPYA
IVLAPTRELAQQIEIEAKKFTQPLGFNVVSIVGGHSLEEQAFSLRDGAEIIIATPGRLVD
CIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTDEAENSTAMSQH
KYRQTMMYTATMPAAVERIARKYLRRPAIITIGGVGEAVDTVEQRVEMISGEDKRKKRLG
EILSSGEFRAPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQDQREAALASVRNGST
DVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRVGRTGRAGKSGVAITFLGSEDSDV
MYDLKQMLIKSPISRVPEELRKHEAAQSKPSRGPGGKKIEDSSGFGGKGGWA
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacagctctgagttattccctccgcttcctcccccagatccagtggagcgccca
cccagcccgcctccgccccctccagaagacttggccactcctccgccgcctccagacaac
atcgcccctccacctcctcccgacgatgtgccacccccgcccccagttgagactcaaaaa
aagcagaagctaggatggggtgcaaagaagctggctgtcactcccctaacccaacgagag
aaactcgcgctggagaaacgggcccaagaggttgaggcagagcggcaagccaaggcccgc
gccaacggcactgatcacagtggttttacatttgaaccaccgtcggtgaggtctcaagcg
tctcgcaatatccgggaggaatcattccggcatgtccccactgggccgcgagcgatgcgc
gacgaacctccagctggacctggtggcatgcggaagggaggccgacagcacacccagtac
aaccgtgaccaagatatgccgccaccctcatctaagactaaaggcgaaaagcgtctaacg
gaagaagacgaagcggcagcgctggctacgttgaccaaacaccgatacatgggagccgac
cagacgtctaacttctccgcaaagaagaagcgtaagcgtaccgcagaccgcaagttcaat
tttgagtggaacaccgaggaagacacgagtggcgattataaccccctttaccagaaacga
caggaagccaacttctttggcagggggcgtttggcaggctttggcgatgatgtcgccgat
gacgtcgctcgcaaatacgcagaagcattggcggcccgtgatcacgaagccggcagtgcg
cgagccaaacaaatgctggagatggaacgccggcgacgtgaggacagtactcgcacacag
attgacaagcattggagtgagaagcgcttggacctcatgcgcgagcgagactggcgtatc
ttcaaggaagatttcaatattgccactaaaggtggcagcgtgcccaatcccatgcgttca
tgggaagagagtcacttgccgaagcgcttgttggagcttgttgaccgtgtcggatataag
gacccaacagctattcagcgcgcggcgattcccatcgctatgcagtcacgtgacctcatt
ggtgttgccgtgacaggttccggtaaaaccgctgccttcttgctcccacttttggtctac
atctcagcgctgccacggcttgatgagaatgagtggcgcaaaaacgacgggccatacgct
attgttctagcacccacacgtgaactggcgcagcagatcgagatcgaagccaaaaagttt
acacaaccccttggatttaacgtggtcagtatcgtcggtggccactcgcttgaagaacaa
gcattcagcctgcgcgatggcgctgaaatcatcattgctacccctggtcgtctagtcgac
tgtatcgagcgtcgcatgctagtcctcagccaatgttgctacgtgattatggacgaagca
gatcgcatgatcgatctcggtttcgaagagcctgtcaacaagatcctggatgccctccca
gtcacgaacgagaagcccgatacagacgaagcagaaaattcaaccgcaatgagccaacac
aagtaccgtcagaccatgatgtatacagccactatgcctgcagccgtcgagcgcattgct
cgcaagtacctccgccgaccagccatcatcaccatcggtggtgtcggcgaagccgtcgat
acagtggagcaacgtgtggagatgatctccggcgaagacaagcgcaagaagcgcctcggc
gaaatcctctcatccggcgaattccgtgccccgattatcgtgtttgtcaacatcaagcga
aactgtgacgctatcgctcgcgaaatcaaacaaatgggcttttcctcagtaactctacac
ggatccaaaactcaagaccagcgtgaagccgcactcgcctcagtgcgcaacggctcaaca
gacgttctcgtcgcaactgacctcgcaggaagaggtatcgatgttcccgatgtgtcacta
gtcgttaactttaatatggccacctcgatcgaaagttacactcatcgtgttggtcgtact
ggtcgtgccggaaagagtggtgttgctatcaccttcctgggcagcgaggatagcgatgtc
atgtacgatctcaaacaaatgcttatcaaatcacccatctcgcgtgtccccgaggaactg
cgcaagcacgaagcggcgcagtctaagccctcacgcggtcctggtgggaagaagatcgag
gacagttccgggttcggaggcaagggagggtgggcgtag
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