KEGG   Penicillium digitatum: PDIP_76080
Entry
PDIP_76080        CDS       T04849                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
pdp  Penicillium digitatum
Pathway
pdp03030  DNA replication
pdp03410  Base excision repair
pdp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PDIP_76080
   03410 Base excision repair
    PDIP_76080
   03420 Nucleotide excision repair
    PDIP_76080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdp03032]
    PDIP_76080
   03400 DNA repair and recombination proteins [BR:pdp03400]
    PDIP_76080
Enzymes [BR:pdp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PDIP_76080
DNA replication proteins [BR:pdp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    PDIP_76080
DNA repair and recombination proteins [BR:pdp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      PDIP_76080
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE zf_DPOE_2 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 ElaD-SseL-like_C
Other DBs
NCBI-GeneID: 26235924
NCBI-ProteinID: XP_014531765
UniProt: K9G0Y8 A0A7T6XH20
LinkDB
Position
Unknown
AA seq 2228 aa
MPSRKPSKYGNKFRSSAASSNPRASKTVQFNSLRSTEATSQDEKFEAIRLADNIDETLGF
PRFESGDTRTGWLVNMHSTSIEDSDVPGGRAGVDYYFLQDDGGSFKATVEYDPYFLISVK
KGYEMEAEEWCRRTFEGMIKKFKRLEKEDLDLPNHLLGYRKTYIKLSFANVSNLLEVRRT
LLPLAEKNKKNESAMDAYVEMTSATAGIDLFDDEMINEQRPNGNLQASDFIVDIREYDVP
YHVRVCIDKDIRIGKWYNVEADHGVISLTCLEDRLQRADPVVLAFDIECTKLPLKFPDAT
TDQIMMISYMIDGQGFLITNREIVSEDIHDFEYTPKPEYNGPFIIFNEPNERGVLERFFE
HVKISKPTVIATYNGDFFDWPFVETRASILGLDMYMEIGFRKNNEDIYQADNCVHMDCFA
WVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSVSDAVATYYL
YMKYVHPFIFSLCTIIPLSADETLRKGTGTLCEMLLMVQAYQHEIVLPNKHKNPPESFYE
GHLLESETYVGGHVESIEAGVFRSDIPTHFSVDPTAIDELLKDLDHALKFSIEVEEKKSM
DDVVNYDDVRAQIVERLLDLKNNPVRNEVPFIYHLDVASMYPNIMITNRLQPDSLIDESS
CAACDFNRPGKTCDRRMPWAWRGEFLPAKRDEYNMIRRATANERFPGRYPKSSMRSFGEL
SIEEQAGVVKKRLQDYSKKIYHKIHDSKTMEREAIICQRENPFYVDTVRDFRDRRYDFKG
KQKSWKNKADGLQSSGGSAAEIEEAKKMIILYDSLQLAHKVILNSFYGYVMRKGSRWYSM
EMAGVTCLTGAHIIQMARELVERIGRPLELDTDGIWCMLPGGFPDNFSFTLKNGKKLSIS
YPCVMLNHLVHAKYTNHQYQALVDPKTFKYETHSENSIFFEVDGPYRAMILPTSKEEDKN
LKKRYAVFNHDGSLAELKGFEVKRRGELKLIKIFQTQLFKFFLEGSNLAETYAAVARVAD
RWLDVLYEHGTTLADEELIDLISENRSMSKTLEEYGSQKSTSITTAKRLAEFLGEQMIKD
KGLNCKYIISSRPRNTPVTERAIPVAIFSAEENIKRFFLRKWLKEDPGDMDPRSVIDWNY
YLERLGSVIQKLITIPAALQKLRNPVPRVAHPDWLQRRINTKDDRFKQKKMTDLFTKSEK
TPLSSTNANILDHRVQHAGDLDEAIAGSTQKMKSPNNKVSQKRKHPGNASNTALDPFASL
PAVMPSMSENYEGFLKYQKQKWKIQKQARIRRRQLFGERTNVASDSLSNFFRNQAQMLYI
STWNVLQLCDTGIPGVVRAFVLIDQKIHALSVRVPRQFFLNLKRDSLPDIDVPDCEVEKV
THTLPNGHPSVYLFKLSLSEEKFLEEADKMDILFQHPSVEGVYEGNIPLSTRAVLKLGSH
CTFDEQHRGVLGDGLDKGFDLSTLLHTSSEQPYLMDSSLVYHYLYHIVSGDRQVFAIFST
SKNEAHIIVLNRTRDVQGLPNVDKIYSELLTRKMQAASGDESQHAFDYQDNIHFKITQVM
TRRKAQLEVGDLIRKIRNDETQPAVLVIQSQQKDRLCHDIPILKEYPVLSVKPEASDMEL
PPLGWQAFVARRLVTRYLYLSSWIQHLTMLARFGDVPLCNLESEDPRYLIDISYARRLQQ
NNVVLWWSSGPRPDHAGYERDDILGALDKVNMPSVNVPGAYSTVCIELEVRNLSINTILT
SSIISEMDGSDTLLAPSGDGEDTGVFYSEKAFASAGVVVLREMVKHWWTEACAGNNMADI
MVQHLIRWVESPVSCLYDRSLHNYVRLLSRKSFQRLMAEFRRVGSHVIFASPTRLLLQTT
KTEVGNAYAYSQYVLKSIRANPSFHFIDLEIKEYWDYLVWYDEYNYGGKGCREVTEADEQ
DLETAMHWQLSRFLPMPMQTIFHDWIVEYIELMHGLKRPELQDGELSSTPRPTQIPIGRT
NEGDDDEITAILSDRFSKPLKKQISGLIRRQRDEMLHPELASDYAFPVLPGVLVSPNDKR
NPSLELTKLLMQVLSLSKTTTLESRLLRRELLALFEVREFSKEGRFENPSASLKLPEMSC
NSCCLIRDLDLCRDEDVLPDASSEASKSTQPWRCPFCHAEYDRLATEEFLIGQVHGLVVE
WQTQDIKCSKCNSLQISDFIEHCSCSGTWTATVDRKEIENKLRVLESVAKFHKLQLLEHI
VEEVLERF
NT seq 6687 nt   +upstreamnt  +downstreamnt
atgccttcacgaaagcccagcaagtatgggaacaagttccgatccagtgctgcatcctcg
aatcctcgtgcctccaaaacagtccaattcaactccttacgctcgaccgaggcaacctct
caagatgagaaattcgaggccattcgattggccgacaatatcgatgagactctcggcttc
ccacgatttgagtctggcgatacaaggaccggctggttggttaacatgcacagcacatcg
attgaggattcggatgtgcctggaggtcgtgccggcgtggattattacttcttgcaggac
gacggaggaagtttcaaagctactgtggagtacgatccttatttcttgatttcagtcaaa
aagggctacgaaatggaggcagaagagtggtgccgccgaacctttgagggcatgatcaaa
aaattcaagcgacttgagaaggaagatctcgacctcccaaatcaccttctcggctaccgg
aaaacctacatcaagctcagcttcgccaatgtgagcaacctcttagaggttaggaggact
ctccttcctctcgcggagaagaacaaaaaaaatgagagtgcgatggacgcatacgttgag
atgaccagtgcgactgctggtatcgacctttttgacgatgaaatgattaatgagcaacga
cctaatggcaacctacaagcgagtgattttattgttgatattcgagaatacgatgtgcca
tatcatgtccgggtctgcattgacaaagacattcggattggaaagtggtacaatgttgag
gcagatcatggcgtgatatcgctgacctgcctagaagaccggcttcagcgtgccgatcct
gtcgttctagcttttgatatcgagtgtacgaagttaccgctgaaatttcccgacgccacg
acggatcagatcatgatgatttcatacatgattgatgggcaagggttcctaattaccaac
agagagattgtgtccgaggacattcacgacttcgagtatactcccaaaccagagtacaat
ggacctttcataattttcaatgaacccaatgaaagaggagtacttgagcgattcttcgag
catgtcaagatctccaagcctactgtgatcgcgacatacaacggcgacttcttcgattgg
ccgtttgtggaaacaagagctagtattctggggctcgatatgtatatggagatcggcttc
cggaaaaacaacgaggatatctaccaagccgataactgtgtccatatggattgtttcgcc
tgggtcaaccgtgacagttaccttcctcaaggaagtcgaggattgaaagccgtgactgtt
gcaaagcttggttacgacccggatgaacttgacccagagcttatgacaccgtatgcgagc
gaaaggccgcagaccctagccgaatactcggtttccgatgctgttgctacctactacctg
tacatgaaatacgtccacccgtttatcttctcgctctgcacgatcattccccttagcgcc
gacgaaacgttgcggaagggaacaggaactttgtgtgagatgcttctcatggttcaagcc
taccagcatgagattgtcttaccaaacaagcacaagaatcccccggagtctttctatgaa
ggtcatcttcttgagtcagagacctacgttggcggccacgttgaaagtattgaagctggt
gtcttccgaagtgatatccctacgcatttttccgttgaccctactgcgattgatgagctt
ctcaaggatctcgaccacgccctcaaattcagtatcgaggttgaagagaagaaatccatg
gatgatgttgtaaactatgatgatgtaagggcacaaatcgtggagcgtttgcttgatctc
aaaaacaatccagtccggaacgaggtgcctttcatttaccatttggacgttgcctccatg
tatcctaacatcatgatcaccaaccgattgcagccggactcattaattgatgagtcaagc
tgtgccgcctgcgacttcaaccgacccggaaaaacctgtgatagacgcatgccctgggca
tggcgaggtgaattcttgcctgccaaacgtgatgaatataacatgatcagacgtgccaca
gcaaatgaacgtttcccaggccggtaccccaagtcttcaatgaggtccttcggcgaattg
agcattgaagaacaagctggagtggtcaagaaacggttgcaggattatagcaagaagatt
taccacaagatccacgacagcaagacgatggagcgcgaggctatcatttgtcaaagagaa
aatccgttctatgtcgatactgtcagagactttcgtgaccgacgatacgatttcaagggt
aagcaaaaatcctggaagaacaaagccgatggtttacagtcatcaggcggttcagccgct
gaaatcgaggaggcaaagaagatgatcattctgtacgattctctccagcttgcgcacaag
gtcattctcaatagtttctacggatatgtgatgcgaaagggctctcggtggtattccatg
gaaatggccggtgtcacttgtctgacaggtgcacacattattcagatggcgagagagctt
gtcgaacgcatcgggcgtcctctggaactggatactgatggtatctggtgtatgcttccg
ggaggattccctgataacttttccttcactctgaagaacgggaagaaactgagtatctca
tacccttgtgtcatgctcaaccacctcgtccacgccaaatacaccaaccaccagtaccag
gcgcttgtcgacccgaaaaccttcaagtatgagactcacagtgaaaattccatcttcttc
gaagtggatgggccgtaccgggcaatgattttgccaacgtcgaaggaggaagacaagaac
ctgaagaaacgatacgcagtcttcaatcacgatggctctttggctgaactcaagggattc
gaagtcaaacgaagaggagagctgaagttgatcaagatcttccagacacagctcttcaaa
ttcttcttagagggttctaatcttgccgagacctatgccgctgtggcccgtgttgctgac
cgttggttggacgttctatacgaacatggaacgacactagccgacgaagagctcatcgat
ctcatctctgaaaatcgaagcatgtcaaaaaccctggaagagtacggttcccaaaagtcc
acatctatcacgacggcaaaacgcctggcagagttcttgggtgaacagatgatcaaggac
aaaggcctcaactgcaaatatattatttcgtcacgcccacgaaatacacctgtcaccgaa
agagccattcctgtggccattttttcagctgaggaaaacatcaagcgattcttcttgcgc
aaatggctgaaagaagatcctggcgatatggatccccgatctgtgattgattggaactat
tacctcgagcgtttgggatccgtgattcagaagttgattaccatcccagctgctcttcaa
aagcttcggaacccagtaccccgagttgcccaccccgattggttgcaacgtcgaatcaat
acgaaggatgataggttcaagcaaaaaaaaatgactgatctattcacaaagtccgagaag
acgccactttcgtcgacaaatgccaatatcctagatcatcgtgtccagcatgctggcgat
ctagatgaagcaattgcgggctcgactcaaaaaatgaaatcgcccaacaacaaggtttcc
cagaagagaaagcatccaggaaatgcttcaaatacagctcttgaccccttcgctagctta
ccggcagttatgccatcgatgtcggaaaattacgagggattcctcaagtatcagaagcaa
aaatggaagatccaaaaacaagccaggattcgccgtcgtcagctgtttggtgaacgcact
aacgttgcctcggattctctgagcaactttttccgcaatcaagctcaaatgctgtacatc
agcacatggaacgtcctgcagctttgcgatacgggcattccgggcgttgtgcgagctttc
gtactgattgaccaaaagattcacgctctcagtgttagagttccacggcaatttttcttg
aacttgaaacgggactctttgcccgacattgacgtaccagactgtgaggtcgagaaagtc
acccataccctacccaacgggcatccctcggtttacttgttcaagctgtctttgtcagaa
gagaaatttctagaagaagctgacaagatggatattctcttccaacaccctagcgttgag
ggcgtttacgaggggaacatcccgctaagcactcgagcggttctcaaactaggaagccat
tgtactttcgatgaacagcaccgtggtgtcctaggcgacggcttagacaaaggcttcgac
ctttcaacactactccacacgtcctctgagcagccctatctgatggactcgtctttagtg
taccactacctatatcacattgtctctggagatagacaagtcttcgcaatcttctcgaca
tccaagaatgaggcgcacatcattgttctcaaccgtacaagagatgttcagggtcttccc
aacgttgacaaaatctacagcgagcttctcacacgtaagatgcaagccgcatcgggtgat
gagtcgcagcacgcgttcgactaccaggacaatatccatttcaaaattacccaggtgatg
acgcggaggaaggctcaacttgaggttggtgatttgatcagaaagattcgaaatgatgag
actcagcctgccgttcttgtcattcaatcacaacaaaaagaccgcctgtgtcacgacatt
ccgatcttgaaggagtatccagtgttgtccgtgaagcctgaagcatcggacatggagctt
cctccgctgggctggcaggcattcgttgcgagacgtctagtcacgcgctatctatacttg
tcttcctggattcagcacttgaccatgctcgctcggttcggtgatgttccactttgcaac
ttggaaagtgaggatcctcgatacctcatcgatatctcgtacgccaggcggcttcaacaa
aacaatgttgtgctctggtggtcatctggcccgcgccctgatcacgcaggctacgaaaga
gatgacatcctaggtgctttggacaaggttaacatgccatctgtcaatgtaccaggcgct
tactccacagtgtgcatcgaactcgaggttcgcaatctgtcaatcaacacaattctgaca
tcttccatcatcagtgaaatggatggcagtgatacgctactagctccttctggggatggt
gaagacactggggttttctattcagagaaggcatttgcctctgccggtgttgtcgtcctc
cgagagatggtaaaacactggtggacagaggcctgtgcagggaacaacatggcggacatc
atggtccagcatttgattcgatgggtggaaagccctgtgtcctgtctatatgaccgttct
ctacacaactacgtgcgattactgtcacggaagtcattccaaaggttgatggcagagttc
aggcgcgttggctcgcatgtcatctttgccagccctacacgcctccttctccaaacgacc
aagaccgaggttggcaacgcctatgcctacagtcagtacgttctcaagtcaatacgcgcc
aatccttcattccactttatcgatctagagatcaaggagtactgggactacctcgtgtgg
tatgatgaatacaactacggaggcaagggctgtcgagaggtcaccgaggccgatgagcag
gatctcgaaacagcgatgcactggcagctcagccggttcctaccaatgcccatgcagact
atattccatgactggattgtggagtacatcgagctgatgcatggcttgaaacgaccggaa
ctccaggatggggagctgtcttcgacgcctcggccaacacagattcccatcggacggaca
aacgaaggagatgacgatgagatcaccgctattctctccgatcgattctccaagccattg
aaaaagcaaatttcaggcttgatccgtagacaacgcgacgagatgcttcatcctgaactt
gcatccgactatgccttccccgttttgccaggagtcctagtcagccccaatgacaaacgc
aacccatctttggagttgacgaaactgctgatgcaggttctgagtttgtctaagacaaca
actctggaatcccggttgctgcgacgcgagctccttgcccttttcgaggtccgagaattc
agcaaggagggccgattcgagaaccctagtgctagcttgaagctcccggaaatgtcctgc
aactcctgctgtcttatacgagatctggatctctgtcgagacgaagatgtgctcccggat
gccagctcagaagccagcaaatccacccagccctggcgatgtcccttctgtcacgccgag
tacgaccgattggcgaccgaagaattcctcattggtcaagtccatgggctcgttgttgaa
tggcagacacaggatattaagtgctctaagtgcaatagtcttcagattagtgatttcata
gagcactgttcttgcagtggtacatggactgcgacagtcgatcggaaagagatcgagaat
aaactgcgagtgttggagagcgtggctaaattccacaagttacaactattggagcacatt
gtcgaggaagtgctggagcgattctga

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