Penicillium digitatum: PDIP_76250
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Entry
PDIP_76250 CDS
T04849
Name
(RefSeq) RRNA processing protein Utp6, putative
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
pdp
Penicillium digitatum
Pathway
pdp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PDIP_76250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_76250
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PDIP_76250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U3_assoc_6
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
26235941
NCBI-ProteinID:
XP_014531782
UniProt:
K9FC58
A0A7T7BIG0
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MSAATDKARFFLEKSVPELKEYERKKIFTKDEISSIVKKRSDFEHKLNARGAQPVDFVRY
AEYEMNLDVLRKKRVKRLGIRSAGFNGQRRIFFVLDRATRKFHGDINLWVQYIEYARKQK
AHKKLLMIFTDALRLHPTSADLWVYAAKHVLDDHGDMTQARSYMQRGLRFCKSARTIWIQ
YAKLELIYIAKLVARQRILGLDEESQKPKPIQEASLDDTDADMIALPSLTAEDINPSTGA
DGEVDQVALQNLNSTPALSGAIPLAIFDAATKHFHNDDRFGQEYFDMAWEFQDVPCLRKI
LEHVVQTMRANKPSSPRTQICYIKFPTAGIPVTSADFPRALGSSLARLREYPMGKDLARQ
VINWLQPVQATEDLDPSLQKVIAATARNAERAAQE
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgccacagataaggctcgattcttcctcgagaagtcagtacctgagctcaag
gaatatgagcgcaagaagattttcacaaaggatgaaatttcctcaatcgtcaaaaaaaga
tctgatttcgaacacaagctcaatgcgcgcggtgcgcagccggtggattttgtgcgttat
gctgaatatgagatgaacctcgatgtgctgcgaaagaagcgggtgaagcgacttgggatt
cgatcggcaggattcaacggccagagacgcatattcttcgttctcgaccgagctacacgc
aagttccacggcgatatcaacctgtgggttcagtacatagaatacgctcgcaaacaaaag
gcacacaaaaagctcctcatgattttcaccgatgctctacgacttcaccctaccagcgcc
gacttatgggtatacgccgctaaacacgtccttgatgaccacggagatatgacacaagcc
cggagttacatgcagcgcggtctacgattctgcaagagcgcgaggacaatttggattcaa
tacgcaaagctggaattgatctacatcgcaaagctggtcgctcgccaacggattcttggt
cttgatgaggagagccagaagcccaagccgattcaagaagcatcactcgacgacaccgat
gccgacatgattgcactgccatcactcacagctgaagatatcaatcccagcacaggggca
gacggagaagtagaccaggttgcgctgcaaaacttgaattccacgcctgctctgagcggt
gctatcccgctcgccatctttgatgctgccacaaagcatttccacaatgatgataggttc
ggccaggagtactttgatatggcttgggaattccaggatgtgccttgtcttcgcaaaatt
ctggaacatgtggttcagacaatgcgcgccaacaaaccttccagcccacggacgcagatt
tgctacatcaagttcccgaccgctggaatccctgtcacttcggccgacttcccgcgggcg
cttggcagctcgcttgctcgcctcagggagtatcccatgggcaaggatctcgcacgccaa
gtgatcaactggcttcaacctgttcaggcaacagaggacctggatccttctttgcagaag
gtaattgcggctaccgcccgtaatgcggagcgcgcggcacaggagtag
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