Penicillium digitatum: PDIP_76360
Help
Entry
PDIP_76360 CDS
T04849
Name
(RefSeq) DNA mismatch repair protein Msh2, putative
KO
K08735
DNA mismatch repair protein MSH2
Organism
pdp
Penicillium digitatum
Pathway
pdp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PDIP_76360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_76360
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PDIP_76360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Vip3A_N
Motif
Other DBs
NCBI-GeneID:
26235952
NCBI-ProteinID:
XP_014531793
UniProt:
K9FBR3
A0A7T6XH08
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MSSRPDLKVDDEVGFIGFYRGLPAPDNNETIRVFDRGDWYSSHGADAEFIARTVYKTTSV
LRNLGRSETGGLPSVTMSVTVFRNFLREALFRLNKRIEIFASAGSGKSNWKLAKQASPGN
LQDVEEELGNVGALSMDSAPIILAVKISARAAEARNVGVCFADASVRELGVSEFLDNDIY
SNFESLVIQLGVKECLVTMDVARKDVELAKIRAIADSCGIAISERPVADFGVKDIEQDLT
RLLRDERSAGTLPQTELKLAMGSASALIKYLNVLTDPTNFGQYQLYQHDLSQYMKLDASA
LRALNLMPGPRDGAKSMSLFGLLNHCKTPVGSRLLAQWLKQPLMDLAAIEQRQQLVEAFV
VNTELRQTMQEEHLRSIPDLYRLAKRFQRKQANLEDVVRAYQVAIRLPGFVSALGDVMDE
QYQTPLETEYTSKLRGFSDSLAMLEEMVETTVDLAALENHEFIIKPEFDDGLRVIRKKLD
KVRYDMDMEHRRVSKNLNQDIEKKLFMENHRVHGWCFRLTRNEAGCIRNKKEYQECSTQK
NGVYFTTSNLQSLRREHDQLSSNYNRTQTGLVNEVVNVAASYCPVLEQLAGVLAHLDVIV
SFAHASMHAPSGYVRPKMHPRGTGNTVLKEARHPCMEMQDDISFITNDVSLIRDESSFLI
ITGPNMGGKSTYIRQIGVIALMAQTGCFVPCTEAELTIFDCILARVGASDSQLKGVSTFM
AEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCFGLFATHFHE
LTALADRYQKAVKNLHVVAFIGNGNESDSEAETKEKKKRQVTLLYRVEPGICDQSFGIHV
AELVRFPDKVVNMARQKAEELEDFTSATTEDGQAQLPAPSLDKYSQEEVEEGSALLKGML
LKWKAATEGKEMTAEQKRQVMRDLAQADEKLQANKVFQGIKAL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacgacctgacttgaaggtcgacgacgaagtcggcttcattggcttctaccgt
ggcctccctgcccccgataataatgaaaccatccgtgtgttcgaccgaggtgactggtac
tcctcgcatggcgccgatgccgaattcattgcgcgcaccgtctacaaaacgacatccgta
ctgcgaaacctaggccgcagcgagacggggggcctcccctcagtcacgatgagcgtcaca
gtcttccgaaacttcctccgcgaagctctcttccgactgaacaagcgtatcgagattttc
gcttcagctggctcaggcaagagcaactggaagctggcaaaacaagccagtcccggtaac
ttgcaagacgtggaagaagagcttggcaacgtgggtgcactgtcaatggactcagcgccg
attattctcgctgtgaagatttctgctcgcgcagctgaggcccggaatgtcggcgtttgc
ttcgctgatgcgagcgtgcgcgagctgggcgtgagtgaattccttgataacgacatctac
tccaatttcgagtcgttggtcattcagctcggtgtgaaagagtgtctcgtgactatggat
gtggctcgcaaggatgtcgagctggcgaagatccgggctatcgcggatagctgtgggatt
gccatctccgagcggcctgttgcagacttcggtgttaaggacatcgagcaggatcttacg
agattattgagggatgagcggtctgcgggcacgctgcctcagacggagctgaaactggcc
atggggtctgcgtccgcgttgatcaagtatcttaatgtcttgaccgatcctaccaacttc
ggtcagtaccaactctaccagcatgatctgtcgcagtatatgaagcttgatgcttcggca
cttcgggcgctgaatcttatgcctggtccgcgggacggggccaagagtatgagcttgttc
ggtttgctgaatcactgcaagacacctgtgggcagtcgtttattggcccagtggttgaag
cagcctctgatggatctggcagcgattgagcaacgccagcagctagtggaggcatttgtt
gttaacactgaactgcgtcagactatgcaggaggaacatttgcgttccattccggatctt
taccggttggctaaacgtttccagcggaagcaggccaatttggaagatgttgtccgagca
taccaggttgccattcgtctgcctgggtttgtgagcgcgctgggtgatgtgatggacgag
cagtaccaaacccctctagagacggaatacacttctaagctccgtggtttttctgacagc
ctggccatgcttgaggagatggtcgaaacaactgttgatcttgctgctctggaaaatcac
gaattcatcatcaagcccgagttcgatgacggccttcgagtcatcagaaagaagcttgac
aaagtacgatacgacatggatatggagcaccgccgagtttcaaagaatttgaatcaagac
attgagaaaaagctttttatggagaatcaccgggtgcacggttggtgcttccgtctcact
cgaaatgaggcgggctgcattcgcaacaagaaagagtaccaggagtgctcgacgcaaaag
aacggcgtatacttcaccacatccaacctgcaatcccttcgccgagagcatgaccaactg
tcctcgaactacaaccgaacccaaaccggtctggttaacgaggtcgtcaatgttgccgca
tcttattgcccagtgttggagcaacttgccggtgtactggcacacctcgatgtcattgtg
agctttgcccatgcttcgatgcatgcaccttcgggatacgttcgcccaaagatgcacccc
cgcggaactggaaataccgttctgaaagaggctcggcatccctgcatggagatgcaggat
gatatttccttcatcacgaatgatgtttccttgattcgcgatgaatcatccttcctcatc
atcaccggtcccaacatgggcggtaaatcaacatacattcgacagatcggtgtgattgca
ctcatggcacagactggctgctttgtcccttgtaccgaggccgaattgaccattttcgac
tgcattcttgctcgggttggtgccagtgactcgcagctcaagggtgtctcgacgttcatg
gcagaaatgcttgaaacatccaacattctcaagtccgccacctcagagtccctgattatc
atcgacgaacttggccgtggaactagcacgtacgacggctttggcctggcctgggctatt
tcggaacatattgttaccgagatccgctgctttggcctgttcgcaactcatttccacgaa
ctcactgccttggcagaccggtatcagaaggccgtcaagaacttgcatgtcgtggcattc
attggaaacggcaatgagagcgatagtgaagctgaaaccaaggaaaagaaaaagcgccaa
gtcactcttctctatcgtgttgagccaggaatctgtgatcagtctttcggtattcatgtc
gctgagcttgtgcgcttcccggataaggttgtcaacatggcccgccagaaggctgaggag
cttgaagatttcacctcagcgacaactgaagatggacaggcacagcttcctgcgccatcg
cttgataaatactcccaggaagaggtggaggaaggcagtgcgctcctcaagggaatgctg
ttgaaatggaaggcagcaactgagggcaaagagatgacggcggagcagaagcgacaggtc
atgcgtgatctggcacaagccgatgaaaaattacaagcaaataaggtgttccagggtatc
aaggctctataa
DBGET
integrated database retrieval system
