KEGG   Penicillium digitatum: PDIP_78410
Entry
PDIP_78410        CDS       T04849                                 
Name
(RefSeq) putative E3 ubiquitin ligase complex SCF subunit sconB
  KO
K10259  F-box and WD-40 domain protein MET30
Organism
pdp  Penicillium digitatum
Pathway
pdp04111  Cell cycle - yeast
pdp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    PDIP_78410
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    PDIP_78410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pdp04121]
    PDIP_78410
Ubiquitin system [BR:pdp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     PDIP_78410
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_Gbeta WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_C Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_SCAP WD40_MABP1-WDR62_2nd F-box-like DSE1_N Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_SPT8 F-box Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st CFAP251_N Beta-prop_WDR90_POC16_2nd Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_Vps41 ASA1 NBCH_WD40 PAC11 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_ACSF4 TRM82_WD Beta-prop_DCAF12 F-box_4 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 26236157
NCBI-ProteinID: XP_014531998
UniProt: K9FAX9
LinkDB
Position
Unknown
AA seq 673 aa
MADAQAHSSTHQSLVFANSGVSANADFNRSLQRKDTDKTTQTLEELARQNVAPFLAKYQP
RQYAPFRSQVPTPSEQNFVNASYCYRHQPDSKCGRRQADEQSMTQLQSELNLLPQSDQQG
IAHVWSLYSAAPAKQRTLMLQGILAQSCFPQLSYISASVRELIRIDFLGALPPELSFKIL
RYLDTASLCRAAQVSSRWRALADDDVVWHRMCEQHIRRKCNKCGWGLPLLDRKRLREAKR
EIELRATNWGNNEPAVGSTEAAMIESCSIVELAASGKRKMESDDDVSALAKRHCASLHQA
HEEDESYFKTRYRPWKEVYRDRFVVGMNWKHKRCSVKVFKGHRDSVMCLQFEDNILMTGS
YDATVKIWDTDTGEELRTLKGHVAGVRCLQFDDTKLITGSLDRSIRIWNWRTGECISKYN
GHAEAVIALHFDSTLLASASVDRTVKIWNFKDKSTFVLPHPQGVNAVKIDSASRTVLTAC
DDGAARLWDLDTKSCIRVFHNHIGAVQQVIALPREIELENHLADCENDHVSTSSQNGDNI
LSTLSPLLEAKSLSCPNSPFGSSFDEDQGRIEPPRYILTSGVDTTIRLWETSTGRCLRTF
FGHLEGIWALSADTLRIASGGMDRMVKIWDPRIPTGQDTYEGHSAAVNCIGLSDSRFITG
GDDYQVRMYDFRA
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggccgatgcacaagcacattcgtccacacaccagagtctggttttcgcaaattcgggg
gtgagtgcgaacgccgactttaaccgctctctgcagcgcaaagacaccgacaagaccacc
caaaccctggaggaactagcgaggcagaatgtggctccgttcctcgcaaaatatcagccg
cgacaatatgcgcctttccgctcgcaagttccaactccgtccgagcaaaatttcgtcaat
gccagctactgctatcgtcatcaaccggactcaaaatgtggcagacgccaagccgatgaa
cagtcgatgacccagctgcagtccgaactgaatttacttcctcaaagtgaccagcaaggt
attgcccatgtgtggtctttgtactccgctgctccagcgaagcagcgaactctcatgctc
cagggaattttagcgcaatcctgcttcccccagctatcctacatttccgccagtgtccgt
gaacttatccgaatcgacttcctcggtgctctccctccagaactgtccttcaaaatcctc
cgttacctcgatacagcttcgttgtgccgagcagcacaagtttcttcccgctggagagcc
ctcgccgacgatgatgtggtgtggcaccgaatgtgcgagcagcatatccgccgaaagtgt
aacaagtgtggctggggtcttcctcttctggaccgcaagcgtctgcgcgaagccaagcgt
gagattgagttgcgtgccactaactggggtaacaacgagcctgccgttgggtctactgaa
gctgcaatgatcgaatcttgttccatagtcgaacttgcagccagtggcaaacgcaagatg
gaatccgatgatgatgtctccgctcttgcaaagcgccactgtgcttcgcttcaccaggcc
cacgaagaggacgagagctacttcaaaacccgttaccgtccgtggaaggaggtttatcgg
gatcgatttgttgtcggtatgaattggaagcacaagcgctgctcagtcaaagtcttcaag
ggccaccgggacagtgtcatgtgtctgcagttcgaggacaacatcttgatgactggatcc
tatgatgctacagttaagatctgggacacagacactggcgaagaattgagaaccctcaaa
ggccacgttgctggcgtgcggtgcctccagttcgatgacaccaaattgatcactggtagc
ctggatcgcagcatcagaatctggaactggcgcacaggtgaatgtatctccaagtacaat
ggccacgccgaagcggtcattgccctccactttgattctactcttcttgcatccgcatct
gtcgatcgcactgtcaaaatttggaatttcaaggacaagtctactttcgttcttccccac
ccacagggtgtcaacgccgtcaagatcgattcagcttcgcgcacagttttgaccgcttgc
gacgatggtgccgcacgcctttgggatctggacaccaagtcttgcatccgagttttccat
aaccatattggtgccgttcagcaagtcattgctttgccccgagagattgaactggagaat
cacctcgccgactgcgagaacgaccatgtcagcacatcttctcaaaacggcgacaacatc
ttgagcacgctttcccctcttctcgaggccaagtctctatcttgcccgaattcaccgttc
ggctcctcctttgacgaggaccaaggccgcatcgaaccgccgcgctatatcctcaccagc
ggtgttgacacaaccatccgattgtgggaaaccagcaccggaagatgccttcgtaccttc
ttcggacatctggaaggtatttgggctctttccgctgatactctacggattgcctctggt
ggcatggatcgcatggtcaagatctgggatcctcggattcctaccggccaggatacctat
gaaggtcacagtgcagctgtcaactgcattggcctgagcgacagccgtttcatcactggt
ggtgatgactaccaagttcgcatgtacgatttccgggcctag

DBGET integrated database retrieval system