Penicillium digitatum: PDIP_80630
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Entry
PDIP_80630 CDS
T04849
Name
(RefSeq) 3' exoribonuclease family protein
KO
K12587
exosome complex component MTR3
Organism
pdp
Penicillium digitatum
Pathway
pdp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PDIP_80630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_80630
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PDIP_80630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
26236379
NCBI-ProteinID:
XP_014532220
UniProt:
K9FYE6
A0A7T6XG66
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MADRRRINGPPGGTRPPVFASLQESSTGVANRAQRQRQPTELRKIFLKTGLIPTASGSSY
LEFEPSASLAAARSNPKSLIPPSSALKLACTVHGPKPLPRSAAFSPNLVLTTHVKYAPFA
ARKRKGHIRDASERDLGVHLETALRGAIIADRWPKSGLDITLTIIEAEDDRWWGDAPDSH
DASWGMMNVLAGCITAASAAIADAHIDCLDLVSGGVAALVSDDPDQSASSAPRLMLDIDP
AEHRSILSACVVAYMPARDEITELWLKGDSSRAALEKDDGRTGHEALIDGAVDAARGANT
VLAEAVRESIARSFASV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctgatagaagacgtatcaatgggccacctggtggtacaagacccccagtctttgca
tcccttcaagaatcctcgacaggcgttgcaaatcgcgcccagcgccagcgccaacccacc
gaattacggaaaatctttctcaaaacaggattgattccaactgcctcaggctcttcatac
cttgaatttgaaccatccgcttccctcgccgccgcccgctccaaccccaaatctctgatc
ccaccctcctcagcactgaagctggcttgtactgtccacggaccaaagccactcccccgc
tctgctgcattctcaccgaaccttgttctcaccactcatgtcaagtatgcgccatttgcc
gcccgcaagcggaaaggacatatccgtgatgccagcgagcgtgaccttggtgtacatcta
gagaccgccctccgtggcgcaatcattgccgaccgctggcccaagagtggtctggatatc
actcttacaatcattgaagcagaagacgaccgttggtggggcgatgccccagactcacac
gatgcgtcatggggaatgatgaacgttctcgccgggtgtatcacagcggcttctgctgcc
attgcagatgcccacattgactgtcttgatcttgtatctggtggtgtcgctgctctggtt
tcagatgacccagatcagtccgcatcatctgccccgcgactcatgcttgacattgatccc
gcggaacatcgatcgattctgtcggcttgtgtggtggcatacatgccggcgcgcgatgag
attactgaactctggctcaagggtgatagttcaagggcggctcttgaaaaggacgacggg
cgtacgggccatgaagcgttgattgacggcgctgtggatgcggctcgtggcgctaacact
gtcttggctgaggctgtgagggaatctattgccaggtcttttgcttcagtctaa
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