Penicillium digitatum: PDIP_81430
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Entry
PDIP_81430 CDS
T04849
Name
(RefSeq) Small nuclear ribonucleoprotein SmF, putative
KO
K11098
small nuclear ribonucleoprotein F
Organism
pdp
Penicillium digitatum
Pathway
pdp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_81430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_81430
03041 Spliceosome [BR:
pdp03041
]
PDIP_81430
03032 DNA replication proteins [BR:
pdp03032
]
PDIP_81430
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
PDIP_81430
Spliceosome [BR:
pdp03041
]
Complex A
U1 snRNP components
Sm proteins
PDIP_81430
U2 snRNP components
PDIP_81430
Complex B
U1 snRNP components
PDIP_81430
U4/U6.U5 tri-snRNP components
PDIP_81430
Complex C
U2 snRNP components
PDIP_81430
DNA replication proteins [BR:
pdp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
PDIP_81430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
CoxIIa
SM-ATX
Motif
Other DBs
NCBI-GeneID:
26236459
NCBI-ProteinID:
XP_014532300
UniProt:
K9FCB0
A0A7T7BHZ8
LinkDB
All DBs
Position
Unknown
AA seq
88 aa
AA seq
DB search
MSVQPVNPRPFLQARVGTEVLIRLKWGQTEYKGILESVDSYINVLLRDTQEFIDGKPTGA
LGLVLIRCNNILWMGSADAIEMTDMEFK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttcaaccggttaatccccgtcccttcctccaggctcgcgtgggcactgaagtc
ctcatccggctgaagtggggccagaccgaatacaagggcattctcgagagtgttgattca
tacataaacgttctgctgcgcgacacgcaagagtttatcgacggaaagcccaccggcgca
ttgggtcttgttctgatcagatgcaacaacatcctctggatgggctctgccgatgcaatt
gaaatgacggatatggaatttaaataa
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integrated database retrieval system
