Penicillium digitatum: PDIP_81630
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Entry
PDIP_81630 CDS
T04849
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
pdp
Penicillium digitatum
Pathway
pdp03013
Nucleocytoplasmic transport
pdp03015
mRNA surveillance pathway
pdp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_81630
09122 Translation
03013 Nucleocytoplasmic transport
PDIP_81630
03015 mRNA surveillance pathway
PDIP_81630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_81630
03041 Spliceosome [BR:
pdp03041
]
PDIP_81630
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PDIP_81630
TREX complex
PDIP_81630
Spliceosome [BR:
pdp03041
]
Complex C
Other components
EJC/TREX
PDIP_81630
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PDIP_81630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
RRM_PARP14_3
RRM_7
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
26236479
NCBI-ProteinID:
XP_014532320
UniProt:
K9FSI0
A0A7T6XG27
LinkDB
All DBs
Position
Unknown
AA seq
252 aa
AA seq
DB search
MSANLDKSLDDLVGSRRQTARHTARRRGGSRRAATKPSAVGGVKKSTKAAPKAAHPAPVA
QTGSSKILVSGLPSDVSEANVKEYFNKSAGPVRRVMLTYNQNGTSRGIASIQFNRADTAA
KATKELNGLLVDGRPMKIEVVYDASHVPTVPASKPLTERVAQKAQPKSAATPKTKENKNA
ATDKGSRRGKGPARPRGRNAGRGKPKTVEELDAEMIDYFNTDVPPAEGTAPVSGTVSAAN
ASQDIGMADEIS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaaccttgataagtcccttgatgatcttgtcggcagccgtcgtcagactgct
cgccacactgctcgccgtcgtggtggatcccgccgcgctgcgaccaagccatccgccgtt
ggaggtgtgaagaaatccaccaaggctgctcccaaggctgctcacccagcccctgtcgcc
cagactggttctagcaagattcttgtcagcggattgccttccgatgtgtccgaggccaat
gtcaaggaatacttcaacaagtctgctggccccgtgagacgggtcatgctcacctacaac
cagaatggtactagccgtggcatcgcctccatccagttcaacagggcagacaccgctgcc
aaagccaccaaggagctcaacggactcctcgtcgatggccgccccatgaagatcgaagtt
gtctatgatgcgtctcacgttcctacagtccctgcttctaagcctctcactgagcgcgtt
gctcagaaggctcagcccaagtccgccgctacccccaagaccaaggaaaacaagaacgcc
gctactgacaagggaagccgccgcggaaagggccctgctcgcccccgtggccgcaacgct
ggccgtggaaagcccaagactgttgaggagctggatgctgagatgattgactacttcaac
actgatgtccccccagctgaaggcactgctcctgtcagtggcactgtctctgcggccaac
gccagtcaggacatcggcatggccgacgagatttcctag
DBGET
integrated database retrieval system