Penicillium digitatum: PDIP_81800
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Entry
PDIP_81800 CDS
T04849
Name
(RefSeq) Ribosome biogenesis protein Ria1, putative
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
pdp
Penicillium digitatum
Pathway
pdp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PDIP_81800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_81800
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
Pre-60S particles
GTPases
PDIP_81800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
Motif
Other DBs
NCBI-GeneID:
26236496
NCBI-ProteinID:
XP_014532337
UniProt:
K9F8H4
A0A7T6XG02
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MESSAISLFFSMLRRPSPDAEPVPKEYLINLIDSPGHIDFSSEVSTASRLCDGAVVLVDA
VEGVCSQTVTVLRQTWVEQLKPILVINKMDRLVTELKMSPAEAFSHLSRLLEQVNAVIGS
FYQGERMEEDLQWRERMEDRLNAAAARDQDSKKPSTEDESAQSINEGTEFEERDDEDLYF
APEKNNVIFCSAVDGWAFTIRQFASIYERKLGIKRTVLEKVLWGDYYLDPKTKRVLGVKH
LKGRALKPMFVQLVLDSIWAAYQATTGGDKGKGDPILLEKITKSLNINIPVYVLRGRDPR
NIMNALFSQWLPLSTALLVSVIEYLPSPPAAQAARLPEMIKTSPGAAFIADDIKTAMVDF
KTGPEQPVVAYVSKMVAIPESELLSNKKRSEGAMTAAEALELARRKREEIAKMQAEARSN
GQEDDFERMTSYFETTSLITETTEEPEEPVEKDDPDHLIGFARLYSGTLSVGDEIYVLPP
KFSPAHPHASPEPKKVTVTDLYLMMGRALEPLKSVPAGVVFGIGGLAGHVLKTGTLCSRL
DGSINLAGVSLSMPPIVRVALEPVNPADLSKMVNGLRLLEQSDPCAQYEVLPSGEHVILT
AGELHLERCVTDLRERFARCEIQTGEAIVPYRETIVYGPEMAAPKNPELGRGAVLTVSAS
KQMTLRLRVVPMPEAVTEFLTKQVGTIKQLQLEKRSEAEGKTETENAAEAVVDGTGEAPE
GQILSKQDFREGLDKLFNEEVKEDKELWKNVVNRITAFGPRRVGPNILVDATAVNTCEKF
LVDDAKQQIDAENQQALLVRDFNDKIAYAFQLATGQGPLCQEPMQGVAVFLEDLSVQSNA
SDELDMGRLTGESIRLVREGISAGFLDWSPRIMLAMYSCEIQATTEVLGRVYAVITRRRG
RILSEIMKEGTPFFTILALLPVAESFGFAEEIRKRTSGAAQPQLIFAGFEALDEDPFWVP
ATEEELEDLGELADKQNVAKRYMDAVRNRKGLVVQGRKLIDAEKQKTLKK
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggagtcttcagccatctcactgttcttctcgatgctccgccgtccaagcccggacgca
gagccagtgcccaaggagtatctgatcaacctgatcgattcgcctggtcacattgatttt
agcagcgaggtctcaactgcatctcgtctttgcgatggtgcagttgtgctcgttgacgca
gtcgaaggtgtctgtagtcagaccgtgactgtgttgcgacagacttgggtcgagcagttg
aagccgatcctggttataaacaagatggaccgcttggtaacagagctgaagatgagccct
gctgaggctttctcgcatcttagtcgactgttggaacaggtcaatgctgtcatcggtagt
ttctaccagggtgaacgcatggaagaagatttgcagtggcgtgaacgtatggaagaccgt
ctcaacgctgcagctgctcgagaccaggacagcaaaaagccgtcgacagaggatgagtct
gcacagagcatcaatgaaggaactgaatttgaggagcgcgatgacgaggatctttatttc
gcacccgagaaaaacaacgtcatcttctgcagtgctgtcgatggctgggctttcacaatc
cggcagttcgcctctatttacgagaggaaactcgggattaaacgaacagttctggaaaaa
gtgctttggggtgattattacttggaccccaaaacgaagcgtgtcttgggtgtgaagcat
ctgaagggacgtgctttgaagcccatgttcgttcaattggtcttggatagtatttgggca
gcttaccaagccaccacagggggtgataagggcaaaggcgacccaatattgttggagaag
atcaccaaatcactcaacattaacatcccagtatatgtcttgcgcggacgtgatccgagg
aacattatgaatgcactgttctctcaatggctgccactatctactgccctgctggtttcc
gtcattgagtatctccccagtccccccgctgcgcaagctgctcgactaccggaaatgatc
aagacatcccccggtgctgctttcattgccgatgatatcaagactgccatggtggatttc
aagacaggacctgaacaacctgtggtggcatacgtcagcaagatggttgcgatcccggag
agcgagcttctatctaacaagaagcgtagcgaaggtgccatgactgcggccgaagccctt
gagcttgcgcgccggaagcgagaggaaattgcaaagatgcaggcagaggcccgcagtaat
ggacaggaggatgactttgagcgcatgacatcatatttcgaaaccacctcattgatcact
gaaacgaccgaggaaccagaagagccagtggagaaggacgaccctgaccatctcattggt
ttcgcccgactctattctggaactctttcagttggtgatgagatctatgttctcccgccc
aagttctccccagcccacccgcacgccagcccggagccaaagaaagtcacagtcacggac
ttgtacctgatgatgggccgggctctcgagccccttaagtccgtaccagccggtgtggtg
ttcggaattggaggtcttgcaggccacgtcttgaagacaggtaccctctgcagccgattg
gatggaagtatcaacttggccggcgtttcactgagtatgccgcccatcgtccgagtcgcg
ctggaaccagtcaatccagcagacctgagcaaaatggtcaacggtctgcgcttgctggaa
cagagtgatccttgtgcgcagtacgaagtgctccctagcggtgaacatgttatcctcaca
gcaggtgaactgcatttggagcgttgtgtgacagatctacgggagcgtttcgcgcgttgc
gaaatccagaccggcgaggctatcgttccctaccgtgaaactattgtttatggccccgag
atggccgcacccaagaatcctgagctaggacgtggagccgttttgacggtttccgcttct
aagcaaatgacccttcgtctgcgcgtggttccgatgccagaggccgtgacggaattcctg
accaaacaagtcggaactattaagcagctccaattggagaagcgctcagaggctgaaggc
aagacagagaccgagaacgcagccgaagctgtcgttgacggtactggcgaggcgcctgaa
ggccaaattctctcaaagcaggacttccgcgagggattagacaagttgttcaacgaggag
gtcaaggaagacaaggaactatggaagaacgtcgtcaaccgaatcaccgcttttggaccc
cgaagagtcggtcctaacattcttgttgatgcaactgcagtcaacacatgcgagaaattc
ttggttgatgacgccaagcaacagattgatgctgaaaaccaacaagcactactcgttcgg
gacttcaacgacaagatcgcatatgccttccagctcgcaacgggccaaggccccttgtgc
caggagcctatgcaaggtgtggccgtgttcctggaagacctatctgttcagtctaatgca
agcgatgagcttgacatgggccgattgacgggcgagtcaatcagactggtccgtgaaggc
atctcggctggtttcctagactggagtcctcgcatcatgctcgcaatgtacagttgcgag
atccaagctaccaccgaagtcctaggccgcgtctacgcagtaatcacccgccgccgaggc
cgcattctctccgaaatcatgaaagaaggcacgccattcttcacaattctcgctctcctc
cccgtcgccgagtcattcgggttcgccgaggagatccgcaagcggacgtccggcgccgcg
caaccgcaactgatttttgcaggcttcgaggctctcgacgaggatccattctgggtgcct
gctaccgaagaagaacttgaggatctgggtgaactagcggataagcagaatgttgctaag
cggtatatggatgctgtgcgcaatcgcaagggtttggttgttcaaggacgtaagttgatt
gacgcggagaaacagaagacattgaagaagtaa
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