KEGG   Penicillium digitatum: PDIP_83490
Entry
PDIP_83490        CDS       T04849                                 
Name
(RefSeq) Transcription initiation factor TFIID subunit, putative
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pdp  Penicillium digitatum
Pathway
pdp03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PDIP_83490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdp03021]
    PDIP_83490
   03036 Chromosome and associated proteins [BR:pdp03036]
    PDIP_83490
Transcription machinery [BR:pdp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     PDIP_83490
   Coactivators
    SAGA/TFTC/STAGA complex
     PDIP_83490
Chromosome and associated proteins [BR:pdp03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     PDIP_83490
    STAGA complex
     PDIP_83490
    TFTC complex
     PDIP_83490
    SAGA complex
     PDIP_83490
    SLIK complex
     PDIP_83490
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st TFIID_NTD2 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_WDHD1_1st WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_EML Beta-prop_HPS5 Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_EIPR1 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_RFWD3 Tricorn_2nd Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N PEP5_VPS11_N LisH Beta-prop_SPT8 Beta-prop_NUP159_NUP214 eIF2A Beta-prop_NOL10_N LisH_PAC1 DUF4550 Beta-prop_DCAF12 Beta-prop_NWD2_C PALB2_WD40
Other DBs
NCBI-GeneID: 26236663
NCBI-ProteinID: XP_014532505
UniProt: K9FBE7
LinkDB
Position
Unknown
AA seq 746 aa
MPARDEDWQSSRRRPPRRRHPTSLTQNIKNYDKPVAADVTPAQSALRPPITKPLKSLTIE
ETRAREQAVIDYLAKKGYSRTEAMLRMESANQEIDGRPLPQLGEDSRPKTRQGFDLLKNW
VEENLDLYKPELRRVLWPLFVYSFFNMVTSFYPQDAKSFFETNKNMFLPEHTDDVRHFEP
ISLPEHLQDNSVAKLYRNNKYRVVLSNPAYTNLLQFLESKDKEGGSVMNAILSSFCSVKT
LDRAADDRFSFAAMLNQINADQTFPAEDEGIPGHHPGSAYTGDNPAMAGTLPRLKLGRLA
MEQLLEEDVRAELAEEDMKQPPAAGRNTLIQEFDQMIKNEDDDEAPNRADLPFPQSTARD
VHIEVKKVMEHRDRFEIKARTGGVGPGLSVCMFTFHNTYDGVSCMDFSDDSQLVAVGFQQ
SYIRIWSLDGTNIQAADPDFDNSPPASSRRLIGHAGPVTAVAFQPCASAREGLSGNDKVA
TNARWLLSSSMDKTIRLWSLDSWQCMVVYKGHDHPVWDLSWGPFSHYFVSGGSDRTARLW
VSDQIRQQRIFVGHDHDVDVVCFHPNSAYIFTASSDHTVRMWAVSTGNAVRMFTGHTGNI
TAMECSRDGKLLASADDQGCIFLWDLAPGRLLKRMRGHGKGGIWSISWSVESTVLVSGGA
DGTVRVWDVAGSQETTQGGRIIGETGTGTRLDAATNPSTSQTKKKKGKDVVVTADQISAF
PTKKSPVYKVKFTNMNLVVAGGAYLP
NT seq 2241 nt   +upstreamnt  +downstreamnt
atgccagctcgggacgaggactggcagtcttctcgccggcggccgcctcgccggcgacac
ccgacctcgttgacccagaatatcaagaattatgataagccggtggcggcagatgtgact
ccagcccaatctgcgctgcgtccacccattacgaagcctttgaaatctctcaccatcgag
gagacacgcgcacgtgaacaggctgttattgattatttggccaaaaagggctacagccgc
acagaagcaatgttgcgcatggagtctgccaaccaggagattgatggacgtccactccct
cagcttggggaagattctcgtcccaagactagacaaggctttgatttactgaagaattgg
gttgaggaaaatcttgatctgtacaagcctgaacttcggcgtgttctatggccgctcttt
gtctattcttttttcaatatggtcacttccttctatccccaggatgcgaaatcgttcttt
gaaaccaacaagaacatgttccttcctgagcataccgatgacgtccgccatttcgagcct
atcagcctaccggagcacctgcaggacaactccgttgctaagctttaccgaaacaacaaa
taccgcgttgtgttgagcaaccccgcttacaccaatcttctccagttcctggaaagcaag
gataaagagggaggttctgtcatgaacgcaattctcagcagtttttgctcagtgaaaact
ttagacagagcagcagatgaccgattcagtttcgctgccatgttgaaccagattaatgct
gaccagaccttccctgctgaggatgaaggcattccgggacatcaccctgggtcagcttat
accggtgacaacccggccatggccggtacacttccccgcttgaagctcggaagactcgct
atggagcaacttctagaggaggacgtgcgggccgaactggctgaggaagatatgaaacaa
cctcctgccgctggccgtaacacgctcattcaggagtttgaccaaatgattaaaaatgaa
gacgacgacgaagctcctaatcgagcagatcttcctttccctcaatccactgctcgtgac
gtccatattgaggtgaagaaagtcatggaacatcgcgaccggttcgagatcaaggctcgc
acaggtggtgtcggtcctggactcagtgtgtgcatgttcacattccacaacacttacgat
ggagttagttgcatggacttttcagatgacagccagcttgttgccgtcggattccagcag
tcatatatccgaatctggagccttgatggcacgaacattcaagctgccgaccctgacttt
gataactcgccacctgccagctcgcgccgtcttatcggccatgctggtccagtcactgcc
gttgcattccagccgtgcgcgtctgctcgcgagggcctttcggggaatgataaggttgcc
accaatgcgcgctggttgctttcatcatccatggacaaaacaattcgcctttggtctctt
gacagctggcaatgtatggtcgtatacaaagggcacgaccaccctgtttgggacctaagc
tggggaccctttagtcattactttgtctccggtggatctgaccggaccgcccgtttgtgg
gttagtgatcaaatccgccaacaacgtatcttcgtcggtcatgatcatgatgtggatgtt
gtttgcttccatcccaactcggcctatattttcaccgccagctctgatcacactgtccgc
atgtgggctgtttcaactggtaatgctgtccgcatgttcactggccacactggcaacatc
accgccatggagtgcagtcgtgatggaaagcttctagcatctgctgatgaccagggttgc
atcttcttgtgggatcttgctcctggtagactgctgaagcgcatgcgtggtcacggcaag
ggcggaatctggtcaatcagctggagcgtggagtctacggtgctggtttccggtggagct
gatggcaccgtgcgagtttgggatgttgcaggctcccaggaaactactcaaggtggccgt
atcatcggtgaaacgggcactggaaccagactggatgcagcaacaaacccctcgacaagc
caaaccaagaaaaagaagggaaaagacgtcgttgtcacagccgaccaaatcagcgctttc
ccgactaagaagtctcctgtctacaaggtcaagttcaccaatatgaacttggtggttgct
ggtggtgcctatttgccttga

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