Penicillium digitatum: PDIP_87580
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Entry
PDIP_87580 CDS
T04849
Name
(RefSeq) RAB GTPase Ypt5, putative
KO
K07888
Ras-related protein Rab-5B
Organism
pdp
Penicillium digitatum
Pathway
pdp04144
Endocytosis
pdp04145
Phagosome
pdp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PDIP_87580
04145 Phagosome
PDIP_87580
04148 Efferocytosis
PDIP_87580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdp04131
]
PDIP_87580
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdp04147
]
PDIP_87580
04031 GTP-binding proteins [BR:
pdp04031
]
PDIP_87580
Membrane trafficking [BR:
pdp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
PDIP_87580
Endosome - Lysosome transport
PDIP_87580
Exosome [BR:
pdp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PDIP_87580
Exosomal proteins of other body fluids (saliva and urine)
PDIP_87580
Exosomal proteins of colorectal cancer cells
PDIP_87580
Exosomal proteins of melanoma cells
PDIP_87580
GTP-binding proteins [BR:
pdp04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
PDIP_87580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
26237072
NCBI-ProteinID:
XP_014530429
UniProt:
K9F4Z9
LinkDB
All DBs
Position
Unknown
AA seq
242 aa
AA seq
DB search
MASRQAAGARPGARFAQFKLVLLGESAVGKVWDTTCDLLLSAADLTAIFQSSLVLRFVKD
QFDDYRESTIGAAFLTQTISLDDTTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDI
TQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTESPDKRAIQEADAEAYAREAGLL
FFETSAKSSTNVKELFTAIAKKLPLDQAGSRNLRATPRPGVDLRPEAPGTQGAASFNGGI
TL
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaggcaagcagcaggagcccgcccgggcgcaagatttgcccagtttaagctt
gtccttcttggagagtccgctgttggaaaggtttgggataccacttgcgatcttctttta
tcagccgctgacttgaccgctatcttccagagttcactagtcctcagattcgttaaagac
caattcgatgactatcgcgagtcgacgatcggagcggcctttctgacacagaccatctcc
ctcgatgatactaccacagtcaagtttgaaatctgggataccgctggccaggagcggtat
aaatcgttggccccgatgtactatcgcaatgccaactgcgctgtggttgtctatgacatc
actcaagcttcgtcgctagacaaagccaaatcttgggtgaaagaactccagcgccaagcg
aatgagaacattgtgatcgccttagcaggcaacaagcttgatcttgtgactgagagccct
gacaagcgagcaatccaagaggccgatgctgaggcctacgcacgtgaggcgggcctactt
ttctttgaaacctctgccaagtcctcgacgaatgtcaaggagctattcaccgccatcgcc
aagaaactacctctggatcaggccggttctcgtaacttgcgggcgacacctcgccccggc
gttgacttgcggccagaggcccctggaactcagggtgccgcatcgttcaacggtggtatt
actctgtga
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integrated database retrieval system