Penicillium digitatum: PDIP_89340
Help
Entry
PDIP_89340 CDS
T04849
Name
(RefSeq) DNA replication factor C subunit Rfc5, putative
KO
K10756
replication factor C subunit 3/5
Organism
pdp
Penicillium digitatum
Pathway
pdp03030
DNA replication
pdp03410
Base excision repair
pdp03420
Nucleotide excision repair
pdp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PDIP_89340
03410 Base excision repair
PDIP_89340
03420 Nucleotide excision repair
PDIP_89340
03430 Mismatch repair
PDIP_89340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdp03032
]
PDIP_89340
03036 Chromosome and associated proteins [BR:
pdp03036
]
PDIP_89340
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_89340
DNA replication proteins [BR:
pdp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PDIP_89340
DNA Replication Termination Factors
ELG1-RFC complex
PDIP_89340
Chromosome and associated proteins [BR:
pdp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PDIP_89340
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PDIP_89340
Check point factors
HRAD17(Rad24)-RFC complex
PDIP_89340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_22
AAA
AAA_16
Rad17
nSTAND6
ATPase_2
T4SS-DNA_transf
ABC_tran
AAA_24
Motif
Other DBs
NCBI-GeneID:
26237248
NCBI-ProteinID:
XP_014530336
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MALLVDKLRPRNLDALSYHPELSDRLRSLARSGDFPHLLVYGPSGAGKKTRIIATLKELY
GPGVEKIKIDARVFQTTSNRKLEFNIVSSVYHLEITPADVGNYDRVVVQELLKEVAQTQQ
VDLGAKQRFKVVVINEADHLSRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTL
LVRVAAPTENDICSALHLAGKKEGWTESEVLNKRIAKESGRNLRRALLMFESIYAQNEKV
TDKTMIPPPDWEALVALTADEILAERSPARLLHVRARLYDLLTHCIPPTTILKTLTFKLV
ARVDDALKPEVIKWSAFYEHRIKLGSKVIFHLEAFVAKFMRIYESYLMGMDF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcttgtggacaagctgcggccacgcaacctcgatgctctctcgtatcacccg
gagctttctgatcgtctgcgatcactggcacgaagcggagatttccctcacttactcgtc
tatgggccctctggtgctggcaagaaaacacggataattgcgacattaaaagaactgtac
ggccccggtgttgagaagatcaagatcgacgccagagtctttcaaacaacaagcaatcga
aagttagaattcaacattgtctcgtccgtgtaccatcttgagattacccctgcggatgta
ggaaactatgaccgagtagtcgtccaggaactactcaaagaggttgcgcagacgcaacag
gtggatctcggcgcgaagcaacggttcaaggtcgtcgtgatcaacgaagccgaccacctc
tcacgcgatgcccaagcagctctcagacggacaatggagaaatacagtcccaatctgcga
ttgattcttctggccaacagtacgtccaacatcattgcgccgattcggtctcgaaccctg
ctggtcagggttgcagcgcctactgaaaacgacatttgctctgcactccatcttgcaggg
aaaaaagaaggatggactgagtccgaggtgcttaacaagaggattgcaaaggagagtgga
cgcaatctgcgtcgtgcgctgctcatgttcgagtcgatttatgcacaaaatgagaaagtt
acggacaagacaatgatcccgcctccggactgggaagcccttgttgccctcacagctgat
gagattcttgctgagcgctcaccggctcggctgttgcacgttcgcgcacgcctctatgat
cttttaactcattgcattccaccaacgaccattttgaaaacgttgacattcaagctcgtc
gcgcgggttgacgatgcactaaaaccagaggttattaagtggtctgccttctatgagcac
cgcatcaagctgggaagtaaagtaatattccatcttgaagccttcgtggccaagttcatg
cgcatatatgaaagttacctgatgggtatggacttttaa
DBGET
integrated database retrieval system
