Polynucleobacter duraquae: CL55_00002460
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Entry
CL55_00002460 CDS
T04207
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pdq
Polynucleobacter duraquae
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdq03400
]
CL55_00002460
Enzymes [BR:
pdq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CL55_00002460
DNA repair and recombination proteins [BR:
pdq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CL55_00002460
Prokaryotic type
CL55_00002460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AKD24579
UniProt:
A0A0E3UZP3
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All DBs
Position
complement(237307..238797)
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AA seq
496 aa
AA seq
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MKKALVWLRRDLRLYDNAALHHALKNNDQVWLAFIFDTDILDPLKSEDLDTSGLKHDRRV
DFIWQGLKQIDEQLRKQGGVLIVQYDKPTTCIPRIAETLGVNTVYTNHDYEPSAIARDAS
ISGSLEKLGIGLETFKDQVIFEKKEILTNSNTVFSIFTPYKNNWLKTLQEKDIAAYDCDP
KKGQLAAIPKSLEAPFPSLESMGFSPTGIEAYLPAGSEGGQSLLEDFLHRIDQYQIGRDF
PAIKGVSYISTHLRFGMLSIRGLVREAHRRMLAGSMGATIWLSELIWRDFYFMILANHPR
LAEGAAFKPGYDNIEWESGATAKRLFKAWCDGKTGYPLVDAAMCQLNQSGYMHNRLRMVV
ASFLTKDLGIDWRWGEMYFAKHLNDFELSSNNGGWQWASSSGCDAQPYFRIFNPITQSQK
FDPEGKFIRRYLPQLDKLSKKSIHAPWESGHIELEAAGVLLGRDYPLPVVNHDEARKKTL
VRYSIVKKVSPESTTD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagctctcgtttggttacgccgtgatttacgcctatatgacaatgctgcgctt
catcacgccctaaaaaataatgaccaagtttggctagcgtttatcttcgataccgatatt
ttagatccactgaagtccgaagatctagatacaagtggcctcaaacatgatcgtcgcgta
gattttatttggcaaggtcttaagcaaattgacgagcaattgcgcaaacaaggtggcgta
ctgattgttcagtacgacaagcccactacgtgtattccgagaattgctgagactttgggt
gtcaataccgtttacaccaatcatgactatgagccatcggcaattgcacgtgatgcctct
atttccggatcactagaaaaacttggtattggattagagactttcaaagatcaagtgatt
tttgagaagaaagaaattctgactaactcgaatacggtgttctccatctttacgccctac
aagaacaactggcttaaaacgctacaagaaaaagatattgccgcttatgactgcgatcct
aaaaaaggacagttagctgccatccccaaatcattagaggctcccttcccatctctagaa
tctatgggctttagcccgacaggtattgaggcttatttgcctgcgggatctgagggtggc
cagagcttattggaagacttccttcaccgcatcgatcaataccaaatcggtcgagacttc
ccagcaatcaaaggtgtgagctacatatccacccaccttcgctttggtatgctctcaatt
agaggcttggtgcgcgaagcacaccgccgaatgcttgctggcagtatgggtgcaacgatt
tggttaagtgaactgatctggcgtgatttttatttcatgattctggccaatcacccacgc
cttgctgagggtgccgctttcaaacctggctatgacaatatcgaatgggaaagcggtgcc
actgctaagaggttatttaaagcttggtgtgatggcaagacaggctacccattagtagat
gctgccatgtgccaactcaaccaaagtggatatatgcacaatcgcctgcgcatggtggtt
gcaagctttcttactaaagatttaggcattgattggcgctggggtgaaatgtatttcgca
aaacacctcaatgactttgaattgtcttccaacaatggtggatggcagtgggcctcttca
tcgggatgtgatgcgcagccctacttccgcatcttcaatccgattactcagtcccaaaag
ttcgatcccgaaggaaagttcattcgtcgctacttacctcaactagacaaactctctaag
aagtcaattcatgcaccttgggaatccggccatattgaactagaggctgccggcgttctt
ctgggtcgtgactatcccctaccagttgttaatcatgatgaagcacgcaaaaagaccttg
gtgcgctatagcattgttaaaaaagtcagtccagaatctacgaccgattaa
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