Polynucleobacter duraquae: CL55_00006590
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Entry
CL55_00006590 CDS
T04207
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pdq
Polynucleobacter duraquae
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdq03016
]
CL55_00006590
Enzymes [BR:
pdq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CL55_00006590
Transfer RNA biogenesis [BR:
pdq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CL55_00006590
Prokaryotic type
CL55_00006590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AKD24992
UniProt:
A0A0E3ZJB0
LinkDB
All DBs
Position
643016..643927
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AA seq
303 aa
AA seq
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MSVRIDGVVLLDKPAGMSSQGAVTAVKRAFNAEKAGHTGTLDPMATGLLPICLGEATKYS
QDLLEADKTYIAQVKFGQRTDTGDAEGLIIEELPPPVFADEVALKLALESLLPAFTGPIS
QVPPMYSALKRDGKPLYEYARAGVELERAPRNITIHAIRWTNINWPEATLEVSCSKGTYI
RVLAEDIGKALGCGAHLVGLRRTEVGHLTLEQSFTIESIQKGLQESSSYILPVDALLQTL
PHLTVDEQQAKRLEMGQRVPLNLPSIEALVRIYRATAAPHNFIGTGDWRSGVLHPKRLIS
SAH
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtacgtattgacggcgttgtcttgcttgataaacctgctggcatgagctcgcaa
ggcgcagtcacagcggtgaagcgtgcatttaatgcagaaaaagctggtcatacaggtaca
ttggatccaatggctacaggcttacttcccatttgcttaggtgaggcaacgaaatactct
caggatttattggaagcagataagacttacatcgctcaagtgaaatttggtcagcgtact
gataccggcgatgctgaaggcctcatcattgaagagttgccgcccccagtatttgctgat
gaagttgccttgaagttagcgctagagtcattattaccagcatttactggccccatcagt
caggttccaccaatgtattctgcgcttaagcgcgatggtaagcctttatatgaatatgct
cgtgctggtgttgagttggagcgtgccccacgaaatattacgattcatgcgattcgttgg
accaatatcaattggccggaagctactttagaagtcagctgcagtaaaggtacttacatc
cgcgtcttggcagaagatattggtaaagctttgggttgtggtgcgcatttagttggcttg
cgccgcactgaagtaggtcacctcactttagagcagtctttcacaatcgaatctatccag
aaaggcttgcaagaaagctcaagctatatcttgccagtcgatgcactcttgcaaaccttg
ccgcatctaacggtagatgagcagcaggcaaaacgtttggagatgggtcaacgagttcca
ctcaatttaccctcgatagaagctctagtgcgtatctatcgcgcaactgctgctccccac
aactttatcggcactggagattggcgctctggggtattgcatcccaagcgtttaatttct
tctgcccattaa
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