Polynucleobacter duraquae: CL55_00010320
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Entry
CL55_00010320 CDS
T04207
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pdq
Polynucleobacter duraquae
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdq03009
]
CL55_00010320
Enzymes [BR:
pdq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CL55_00010320
Ribosome biogenesis [BR:
pdq03009
]
Prokaryotic type
ribosomal protein modification factors
CL55_00010320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AKD25365
UniProt:
A0A0E3ZM67
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All DBs
Position
996397..997755
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AA seq
452 aa
AA seq
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MAGKVGFVSLGCPKALVDSELILTQLSAEGYETAKDYSGADLVVVNTCGFIDSAVEESLA
AIGEALAENGKVIVTGCLGARKNADGSDLIQSIHPKVLAVTGPHATQEVMQAIHLHLPKP
HDPFTDLLPPIGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLLEAKKL
FESGVKELLVVSQDTSAYGVDIQYRTGFWDGKPVKTRMFDLVNALNQIAREHQAWVRLHY
VYPYPHVDDVLTLMAEFADHGFGVLPYLDIPLQHSHPDVLKRMKRPACGEKNLERIQAWR
ATCPDLVIRSTFIAGFPGETEEEFLHLLNFLDEAQIDRAGCFAYSPVDGATANTLDNPVP
DALREERRARFMAKAEEISIKRLAKKVGKRIQVIIDRVDESGGVGRTIGDAPEIDGLVRV
LSPSKPSKRYRAGEIIKVTVINSQGHDLIAET
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggtaaagttggttttgtttccttaggctgccctaaggcgctagttgattctgaa
ctcatcctcacgcaactgagcgctgaaggatatgagactgctaaagattattctggtgcc
gatctggtggttgtcaacacctgtggctttattgattctgctgtagaagaaagtctagcg
gcgattggtgaggccttagctgaaaatggcaaggtgattgtgacgggttgtttaggcgcc
cgcaagaatgcagacggtagcgatctcattcagagcattcaccccaaagtccttgctgtg
actgggccacatgccacccaagaggtgatgcaagccattcatttacatctcccaaagccg
catgatccttttacggatttgctcccaccgattggcgtcaagctcacaccaaaacattat
gcgtacttaaagatatctgagggttgtaatcatcgctgcactttctgcattatcccaagc
atgcgtggcgatctagtttcacgtccgattggtgaagtcttgcttgaggcaaaaaaacta
tttgagtcaggtgtaaaagagttgctagttgtctcacaagatacaagcgcctatggcgtt
gatattcaatatcgcactggcttttgggatggcaaaccggttaagacgcgaatgtttgat
ttggtaaatgctttgaaccaaattgcaagagaacatcaagcctgggtgcgactgcattat
gtctatccatacccacatgtcgatgatgtactgactttaatggctgagtttgctgatcac
ggttttggtgtacttccttatttagatattccgttgcaacactctcatccagatgttctg
aagaggatgaaacgtccagcttgtggtgaaaagaatttagagcgcattcaagcatggcga
gctacttgccctgacttggttattcgcagtacttttattgcgggcttccctggtgaaact
gaggaagagttcttgcacctattaaatttcctcgatgaagctcagattgatcgcgccggt
tgttttgcctattcaccggtggatggtgcgactgccaatactttggataatccagttccg
gatgcattgcgagaagaacgtcgtgctcggtttatggctaaagctgaggaaatctctatc
aagcgacttgctaaaaaagtaggcaagcgtattcaagttattattgatcgggtagatgaa
tctggtggagtgggccgaaccattggtgatgccccggaaatcgatggcttggtgagggtt
ttgtctccaagtaagccatccaagcgctaccgcgctggtgaaatcatcaaagtaacggtg
attaactcccaagggcatgacctaatagccgaaacttga
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