Polynucleobacter duraquae: CL55_00012060
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Entry
CL55_00012060 CDS
T04207
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pdq
Polynucleobacter duraquae
Pathway
pdq03030
DNA replication
pdq03430
Mismatch repair
pdq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CL55_00012060
03430 Mismatch repair
CL55_00012060
03440 Homologous recombination
CL55_00012060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdq03032
]
CL55_00012060
03400 DNA repair and recombination proteins [BR:
pdq03400
]
CL55_00012060
Enzymes [BR:
pdq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CL55_00012060
DNA replication proteins [BR:
pdq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CL55_00012060
DNA repair and recombination proteins [BR:
pdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CL55_00012060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_16
RuvB_N
AAA_14
AAA_5
AAA_22
AAA_30
AAA_18
AAA_19
Glyco_tranf_2_5
AAA_24
AAA_assoc_2
nSTAND3
AAA_2
TsaE
Mg_chelatase
SKI
NTPase_1
APS_kinase
RNA_helicase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AKD25539
UniProt:
A0A0E3V0T4
LinkDB
All DBs
Position
complement(1181089..1182780)
Genome browser
AA seq
563 aa
AA seq
DB search
MTALALARSWRPKTFSQLVGQDHVVKALTHALDQGRLHHAWLFTGTRGVGKTTIARIMAK
ALNCTGEDGQGRMTSEPCGKCPACLEIDAGRFVDYIEMDAASNRGVDDIAALLEKAAYAP
SNARYKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTILSRCLQFNL
KQMPVPLIVEHLEKVLAAEKVDCETNALRVLAKAAQGSMRDALSLTDQAIAYAAGKVTEE
AVRGMLGTLDDAYLIKILDALIAKDGATLLAISNEMGERSMSFSLALADLSSLIQKIAAA
QIVPESVLEDWPEAAEIHRLASALTKEEAQLFYQISITSRPDLSLAPDEQTGFAMTLLRM
LAFRPGNETPSRAGGNSSNSNSSSNSAPPVASVTSAPRSPRPANQTAAPVRSAPPAPAAV
VAPAKPAASAPIASSADRPDWHTLVRQLPIKGLVQQLAFQTELQDWEDSPAGVRATVVTP
MPQLASEASINRLADSLTAYFGKPVKVVIEKGEVEGKTVAKVDAQIHQEKRLNAEQLIAQ
DPFIQQLQKEFGAKVVGGSVKPI
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgacagcattggctttagcccgttcgtggcgccctaaaaccttctcccaattggtagga
caagaccatgtggtcaaagctctgacccatgccttagatcagggtcgattgcaccacgct
tggctctttacaggcactcgcggggtcggaaagaccacaatcgcccgaattatggccaaa
gccctcaattgcacgggggaagatggtcagggtcgcatgacctcagaaccctgtggaaaa
tgcccagcttgcctagaaatcgatgcaggccgctttgttgactatatagagatggatgct
gcgagtaatcgcggggtagacgacattgccgctctattagaaaaagcagcctacgcaccg
agtaatgcacgttacaaggtctacatgattgacgaggtgcacatgctcaccaatcatgcc
tttaatgccatgctcaaaacgctcgaagagccgcctgaacatgtgaagttcatactagca
actacagatccacaaaagattccagttaccattttgtcgcggtgcctgcagttcaatctc
aagcaaatgccagtaccgctcatcgtggagcatttagaaaaagtactcgccgcagaaaaa
gtggactgtgagaccaatgcactacgtgttttagcaaaagcagcgcaaggctccatgcgt
gatgctttatcactgactgatcaagccattgcgtacgccgcaggtaaagtaactgaagaa
gctgtgcgcgggatgctgggcacgctcgatgacgcatacctcattaaaattttagatgca
ctcatcgcaaaagatggcgcaacactgttggcgatttccaatgaaatgggtgagcgcagt
atgtctttctcattagcgctggcggatctatcgagtctcattcaaaaaatcgctgccgcg
caaattgttcccgaatctgtcttagaagattggccagaagctgcagagattcatcgctta
gctagcgcactgacaaaagaagaagcgcaactcttctaccaaattagcattacaagccgc
cccgatttatcactggcaccagatgagcaaactggctttgccatgacgctcttgcggatg
ttggcctttcgtccaggaaatgaaactcccagcagagcagggggcaacagtagtaatagc
aacagcagcagtaactccgcacccccggtagcttcggtaacatcagcacctcgatcaccc
agaccagcaaaccaaacagctgccccagtcaggtctgcacccccagctccagctgcggtt
gtagcgccagctaagcctgctgcatcggcgccaattgcttctagtgcagatcgtcctgac
tggcatactttggtccgccagttgccaattaaaggcctagtacaacagttagcgtttcag
acagagttacaagattgggaagattcaccagcaggcgtgcgcgctacggtggttacgccc
atgccgcaattagcttctgaagcctctattaatcgtcttgcagattcactgactgcatac
tttggcaaacctgtgaaagtagtgattgaaaaaggtgaagtggaaggcaaaaccgtagca
aaagtcgatgcccagatacaccaagagaaaagactcaatgcagagcaattgattgcacaa
gatccatttattcagcaattacaaaaagagtttggagccaaagtagttggtggctctgtg
aagccaatctaa
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