Polynucleobacter duraquae: CL55_00012230
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Entry
CL55_00012230 CDS
T04207
Name
(GenBank) DNA polymerase III, epsilon subunit and related 3'-5' exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
pdq
Polynucleobacter duraquae
Pathway
pdq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CL55_00012230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdq03400
]
CL55_00012230
DNA repair and recombination proteins [BR:
pdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CL55_00012230
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
AKD25556
UniProt:
A0A0E3ZMF0
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All DBs
Position
1192069..1192725
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AA seq
218 aa
AA seq
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MTQAIIFDVEATDKTDAVIIEAASLDVTSINPLSVGNPWVQRYNPGKPISLGALATHHIM
DEELVDCPSSSSFKLPTGIQYIIGHSVDFDWEAIGKPDVKRICTLALARSLWPDLDSHTQ
SALLYHFERSTAREQLRDAHSALADVWICSKILGHIIDRLHPSSLDALWEMSEKARIPTI
MPFGKHKGELISQVPSDYKQWMLRQDNVSEYLRKALQA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagccattatttttgatgttgaagctactgataagacggatgccgtcattatt
gaagcggcctcattagatgtcacctctattaatccattatctgttggtaatccctgggta
caacgttacaacccaggcaaaccgattagcctaggtgcactagcaacccaccacatcatg
gatgaagagctagtagactgcccatctagcagctcgttcaaattacctactggtattcaa
tacatcatcggtcatagcgttgattttgattgggaggccattggtaaaccggatgtcaaa
cgcatttgcactctggcgcttgctcgcagtctttggccggatctagatagtcacacccaa
agtgccctgctctatcactttgaacgttcgactgctagagagcaactgcgtgatgcacac
agcgcgttagctgatgtctggatctgctctaagatattagggcacattattgatcgcttg
cacccgagctctttggatgccttatgggaaatgtcagaaaaagcacgcattccgacgatc
atgccttttggtaaacacaaaggtgaattaatcagtcaagtgccatccgattacaagcaa
tggatgctgcgtcaagacaatgtctctgagtaccttcgtaaggccttacaggcttaa
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