Polynucleobacter duraquae: CL55_00014170
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Entry
CL55_00014170 CDS
T04207
Name
(GenBank) succinyl-diaminopimelate desuccinylase, proteobacterial clade
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pdq
Polynucleobacter duraquae
Pathway
pdq00300
Lysine biosynthesis
pdq01100
Metabolic pathways
pdq01120
Microbial metabolism in diverse environments
pdq01230
Biosynthesis of amino acids
Module
pdq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CL55_00014170
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdq01002
]
CL55_00014170
Enzymes [BR:
pdq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CL55_00014170
Peptidases and inhibitors [BR:
pdq01002
]
Metallo peptidases
Family M20
CL55_00014170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
AKD25750
UniProt:
A0A0E3ZM34
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All DBs
Position
1383532..1384683
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AA seq
383 aa
AA seq
DB search
MSATLELTEALISCRSVTPADGGCQDLIAKRLQAIGFHTESVVSGPENFQVTNLWAIKKG
VSGDQGKVLVFAGHTDVVPTGPLEKWTNDPFTPTIRDGMLYGRGAADMKTSLAGFVVATE
EFVITHPDHKGTIAFLITSDEEGPANDGTVIMCERLQKQGQRLDYCVIGEPTSVDQLGDM
IKNGRRGSLSGKLRVKGIQAHIAYPHLGKNPIHLSAPAIQALVETEWDKGNQYFQPTSFQ
ISNIHAGTGANNVIPGELAIDFNFRFSTESKPEELRSRLEGILKAAGLDFEIDWVLGGSP
FITGDGALAGALRKAIKAETKIDTELSTTGGTSDGRFIAKICKEVVEFGPLNATSHKIDE
CVIVNDVVPLKNIYRKTLEQLVA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaccctagagttaactgaagccctcatctcctgccgctcggtcaccccggcg
gacggaggctgtcaggacctcattgccaaacgccttcaagctattggttttcacacagag
agcgtagtgagtggtcccgagaattttcaggttactaatttgtgggcaatcaaaaaaggt
gtgtctggagatcaaggtaaggtcttagtgtttgctggccacactgatgttgtgccaact
ggcccactagagaagtggaccaatgatccgtttaccccaaccatcagagatggcatgctg
tacggtcgtggggctgcggatatgaaaacctctttagcaggatttgtggtcgctaccgaa
gaatttgtcatcacccatccagatcacaaaggcacgattgcctttttgattacaagcgat
gaagaaggtccagctaacgacggcactgtcatcatgtgcgagcgcttgcaaaaacaaggc
cagcgtttagattactgcgtgattggtgagccaacttcagttgatcaactcggtgacatg
attaaaaatggtcgccgcggatcactctccggcaagcttcgggttaaaggtattcaggcg
catatcgcctaccctcacctgggtaaaaatccgattcacctttcagcacctgcaattcaa
gcgctagttgagactgagtgggataaaggtaaccagtatttccagcctacgagctttcag
atttcgaatattcatgcaggtactggtgcgaacaacgtcattcctggcgagctagcgatt
gatttcaacttccgtttctccactgagagtaagccagaggaattgcgtagccgcctagaa
ggaattctcaaagctgcaggtctcgattttgaaattgattgggtcttaggtggtagccca
tttattactggtgatggcgcccttgctggcgccctacgtaaggccattaaggctgaaacc
aaaattgatacagaactctccactactggcggcacaagtgatggtcgctttattgcgaag
atctgcaaagaagttgtcgaatttggcccgctcaatgcgactagccataagattgatgag
tgcgtgattgtgaatgatgttgtgccactcaaaaatatctatcgcaagacactcgagcaa
ctggttgcttaa
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