Polynucleobacter duraquae: CL55_00014190
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Entry
CL55_00014190 CDS
T04207
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pdq
Polynucleobacter duraquae
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdq03400
]
CL55_00014190
DNA repair and recombination proteins [BR:
pdq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CL55_00014190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
DnaB_C
ChlI
Lon_C
AAA_16
AAA_22
RecA_N
nSTAND3
nSTAND_NTPase5
GvpD_P-loop
AAA_30
AAA_24
Rad51
AAA
NTPase_1
SLFN-g3_helicase
TackOD1
GvpD_bR2
Zn_ribbon_8
AAA_14
AAA_5
DAP3
ABC_tran
PAXNEB
zf-RING_10
NACHT
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AKD25752
UniProt:
A0A0E3ZMH4
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All DBs
Position
complement(1385633..1387051)
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AA seq
472 aa
AA seq
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MHLNVLKKTKRALSSINPLAKIKTIYICQSCGGTFAKWQGQCPSCQAWNTLEEGLPEVSS
NTRFQGLAQSLPRQKLSAISAEDLPRFSTGVEEFDRVLGGGLVPGGVVLLGGDPGIGKST
LLLQALAEMSAAGMNVLYSSGEESAAQIALRAKRIALDAPQLEVLAEIQLEKLLSIMDTV
KPQVLVVDSIQTLYSEVLSSAPGSVAQVRECAAQLTRAAKSSGICVLMVGHVTKDGHLAG
PRVLEHIVDTVLYFEGDTHSSFRLVRSIKNRFGAVNELGVFAMTEKGLRGVANPSAIFLS
QHAEMVPGACVLVTQEGSRPLLVEIQALVDTAHIPNPRRLAVGLEQARLAMLLAVLHRHA
GVACFDQDVFLNAVGGVKISEPAADLAVLLAIQSSIRNKALPKELIVFGEVGLAGEIRPC
PRGQERLKEAAKLGFTVAIIPKANMPKAKIPGLRVIPVERIDQAISAAAELS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcacctaaacgtgctcaagaaaacaaagcgggcactcagctcgattaatcctttggct
aaaataaaaacaatctatatctgtcagtcatgcggcgggacctttgccaaatggcaaggt
cagtgcccctcatgccaggcatggaatacgctggaggagggcttgcctgaggtgagctca
aacacccgctttcagggattggcgcagtcacttccccgccaaaagctttctgctatttcg
gccgaagatctcccgcgctttagcactggcgtagaagagtttgatcgcgtactaggtggt
ggattagttcctggtggtgttgtgctcttaggtggcgatcctgggattggtaaatctact
ctcttgctccaagcccttgctgagatgagtgctgctggtatgaacgtgctctatagcagt
ggcgaagagtctgcagcgcaaattgcattacgtgcaaaacgtattgcactcgatgcgcca
caattagaagtgctcgctgagattcagttagaaaagctcttatccattatggatacggtg
aagccacaggtcttggtggtcgattccattcagactttgtattcggaggtgctcagctca
gctccaggttcggttgcgcaagtacgagagtgtgcagcacaattaaccagggccgctaaa
tcaagtggtatctgcgtcttgatggtgggccacgttactaaagatggtcatttagcgggc
cctcgtgtactggaacatattgtagataccgtcttgtattttgagggtgacacgcattcc
tcatttagattagtgcgctcgattaaaaatcgttttggcgcagtcaatgagttaggtgtg
tttgctatgaccgaaaaaggtctgcgtggcgttgcaaacccatcggcgatttttctttcg
cagcatgcggagatggttccgggtgcctgcgtattggttacacaagagggcagtcgccca
ctgttggtagaaattcaggcgctagtagacactgcgcatattcctaatccacgtcgcttg
gcagttggtttggagcaagcgcgtttagccatgctcttagcggtgttacatcgtcatgct
ggtgttgcctgctttgatcaggatgtcttcttaaacgcggttggtggtgtgaagatctca
gagccagcagctgacttagcagtgttgctagcaattcagtcttcaattcgcaataaggcc
ctacccaaggagttgattgtatttggtgaggttgggttagctggagaaattcgcccctgc
ccacggggtcaggaacgcttgaaagaggccgctaaacttggatttactgtagcaatcatc
ccgaaggccaacatgcctaaggcaaagattccgggattaagggtgataccagtagaacgt
attgatcaagcgatctctgctgcagcggagcttagttaa
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