Polynucleobacter duraquae: CL55_00015780
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Entry
CL55_00015780 CDS
T04207
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
pdq
Polynucleobacter duraquae
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdq03032
]
CL55_00015780
03036 Chromosome and associated proteins [BR:
pdq03036
]
CL55_00015780
03400 DNA repair and recombination proteins [BR:
pdq03400
]
CL55_00015780
DNA replication proteins [BR:
pdq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CL55_00015780
Chromosome and associated proteins [BR:
pdq03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CL55_00015780
DNA repair and recombination proteins [BR:
pdq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CL55_00015780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
HU-CCDC81_bac_2
ThiS
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AKD25911
UniProt:
A0A0E3ZMR2
LinkDB
All DBs
Position
complement(1541085..1541429)
Genome browser
AA seq
114 aa
AA seq
DB search
MSDQEQQAITRSELVESLAEQFPQLLPRDVELAVKTLLDTMTHALAEGKRIELRGVGSFV
LHHRPARTGRNPKSGEKVLIPEKRVPHFKPGKELRERVDYNPLKQVSPKEGSGA
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcaagagcaacaagcaattacccgttccgagctcgtggagagtttggcggag
cagtttccccagctactaccaagagacgtagagttggcagtaaaaactttgctagacaca
atgactcacgctttggctgaaggtaagcggattgagttgcgcggtgttggtagtttcgtt
ttgcatcaccgtcctgcacgtacaggtcgtaacccaaaatctggtgagaaggtgttgatc
ccagaaaagcgtgtgccccatttcaagccgggtaaagaattacgtgaacgtgttgattac
aatcctctgaagcaggtgagccctaaagagggttctggtgcctag
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