Polynucleobacter duraquae: CL55_00016450
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Entry
CL55_00016450 CDS
T04207
Name
(GenBank) Uncharacterized protein related to deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pdq
Polynucleobacter duraquae
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdq03400
]
CL55_00016450
Enzymes [BR:
pdq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
CL55_00016450
DNA repair and recombination proteins [BR:
pdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
CL55_00016450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AKD25978
UniProt:
A0A0E3V221
LinkDB
All DBs
Position
complement(1602281..1603807)
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AA seq
508 aa
AA seq
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MKKLVLILGDQLDIDSPILKNLNPKTEQVVMIESIDEAQYVWSHKAKIVLFLSAMRHFAE
QLEERGLPLIYIKQSPQSIGDTLRDLIPKKQFTHLVCLEPGEYRLKCEIENVASEFSIDL
EMQEDPHFYCSRHEFENWVAGKKELRLEYFYRLMRKTHNILVDKEGNPEGGQWNFDRDNR
KPFPKKGPGLIPPPELFEPDDITQEVIALVEKKFPKHPGSLEHFQWPVTRAQALQALKGF
VEHRLVTFGIHEDAMWTDTPFGWHSLLSSSMNLKLLNPREVIAAVLKAWKKDDLDLATLE
GFIRQILGWREFVRGMYYLDMPQMALDNFYDHQNALPSWYWTGNAKMKCMQQAIGQTLEY
GYAHHIQRLMVTGNFALLAEILPKEVCDWYLAVYVDAIEWVELPNTAGMALFASGGRFTS
KPYIASGAYIKRMSNYCGSCQYKPDVRFGEGACPMTTLYWNFLIKHRTQFEASPRTRLMT
ANLSRISDTDQQAIVLHAKGLLADLSSL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagcttgttctcattctgggtgaccaactcgatatcgatagcccgatattaaaa
aacctgaatcccaagactgagcaagtcgtcatgattgagtctatcgatgaggctcagtat
gtttggtcacataaggccaaaatcgttttattcttatcggcgatgcggcattttgctgag
caactggaagagcggggtttgccgctgatctatattaagcagtctccgcagtcgattggc
gatacgctacgagatttgattcccaagaaacaatttacacacttggtatgtcttgagccg
ggggagtatcgactcaagtgcgaaatagagaatgtggcatctgaattcagcatcgattta
gaaatgcaagaggatccccatttctattgctcacgccatgagtttgaaaattgggttgca
ggcaagaaagaattgcgtttggagtatttctaccgactgatgcgtaagactcacaatatc
ttggtcgataaagagggtaatccggagggcggtcagtggaatttcgatcgagataatcgc
aagccgtttccgaaaaaagggccgggattaattccgccgccggagttgtttgagccggat
gacattactcaagaagtcattgcgttggttgagaaaaaatttcccaaacatcctggatct
ctggagcactttcagtggccagtcacacgcgcacaagctttgcaggcactgaaaggattt
gtggagcaccgcttagtgacctttggcattcatgaagatgcaatgtggacggatacgcct
tttggttggcactccttactctccagctcgatgaacttaaagttgctcaatcccagagag
gtgattgcggccgtcctcaaagcatggaagaaagatgatttagatcttgcaacgttagaa
ggatttattcgtcaaatcctaggttggcgagaatttgtacggggcatgtactaccttgat
atgccccaaatggccttagataatttttatgaccatcagaatgcattgccctcctggtat
tggactggcaacgccaagatgaagtgtatgcagcaggcgataggccaaacgctggagtac
ggttacgcccaccatattcaacgtctgatggtgactggcaactttgcattgcttgcagaa
atcttgccaaaagaggtttgtgattggtatttggcagtgtatgttgatgcgattgaatgg
gtggagttacctaatacagcgggcatggccttatttgcgagtggcggccgttttaccagc
aaaccttatattgcgagtggcgcctacattaaaagaatgagtaattattgcggctcctgc
caatacaagcccgatgttcgatttggggaaggcgcctgcccaatgaccaccctctattgg
aacttcctcatcaagcatcgcacccaatttgaggcaagcccccgtactcggctgatgact
gccaacttatcccgtattagcgatacagatcagcaggcaatcgtgctccatgccaaaggc
cttctagcggatttgagctccctataa
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