Polynucleobacter duraquae: CL55_00017100
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Entry
CL55_00017100 CDS
T04207
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdq
Polynucleobacter duraquae
Pathway
pdq03420
Nucleotide excision repair
pdq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CL55_00017100
03430 Mismatch repair
CL55_00017100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdq03400
]
CL55_00017100
Enzymes [BR:
pdq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CL55_00017100
DNA repair and recombination proteins [BR:
pdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CL55_00017100
MMR (mismatch excision repair)
Other MMR factors
CL55_00017100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKD26043
UniProt:
A0A0E3V246
LinkDB
All DBs
Position
complement(1664338..1666725)
Genome browser
AA seq
795 aa
AA seq
DB search
MYSDLLANLNPEQREAVTLPPVNENGQAQSALILAGAGSGKTRVLTTRIAWLIQTGQVSP
IGVLAVTFTNKAAKEMMLRLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSTFQIL
DTQDQLSAIKRLLKGLKVDDEKYPPKQLQYFIAHAKERGQRAKELSVGDDFQAKMAQLYE
AYDEQCQREGVVDFAELLLRSYELLKHNEAIRTHYQERFRHILIDEFQDTNALQYAWLKL
LSGHDASRVNVSGMGSSAVFAVGDDDQSIYAFRGADVENMRLYEKQYHPMMVKLEQNYRS
HGHILDTANYLISNNTDRLGKNLRTDAGHGELVRIYDAPSDHAEAAWLVDEIKALVSSGI
KRTEIALLYRSNAQSRIIEHALFSAAIPYRVYGGLRFFERAEIKHALAYLRLLENPNDDT
SFSRVVNFPTRGIGARSIEAVQDAARAQNSSLYLAASTLDGKAGASLGGFVRLVDHMREA
TRYNTLPETVEFVIQNSGLIQHYLSEREGQDRVENLQELINAATAFIAEEGYGQDATAAT
LPGENAPGVVEVSPLAAFLSHASLEAGDNQAQAGQDAVQLMTVHSAKGLEFTSVFITGLE
EGLFPHENSINEQHGLEEERRLMYVAITRAKERLYLSHTQSRMLHGQVRYNMPSRFLEEL
PCDSLKWLTPKVKDARWGGTGNGNGGRSGSTWQDGYTRQREFGSNDFFDSGNERERPARQ
IGRVGSASTAVTRMAAPPRGNYPFTIGQNVFHTKFGEGRVTGLEGNDADARAQVNFKRHG
VKWLQLSIAKLAAID
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagacctactcgcaaaccttaatccagaacaacgcgaggcagtgaccctcccg
ccggtaaatgaaaatggccaagcccagtcagccctgattttggctggcgctggcagtgga
aaaacccgcgttctcacgacccgtatagcttggttgatccaaacaggccaggtttcacct
attggcgtcctagcggtgacctttactaataaggccgctaaagagatgatgctgcgctta
agcgccatgctgcctattaacactcgaggcatgtggatcggtacttttcatggtctttgc
aaccgtttattgcgtgcgcatcacaaagaagcaggtttgccgtctacttttcagattttg
gatacccaggatcagctttccgccattaagcgccttttgaagggcttaaaggtcgatgat
gagaaatacccacctaagcagttgcaatatttcattgcccatgccaaagagcgtggtcag
cgcgctaaagaattatccgtaggggacgactttcaggcgaagatggctcaactctatgaa
gcctacgatgagcagtgccagcgtgaaggtgtagtcgactttgctgaactcttattacgt
agttatgaattgctcaaacataacgaggccattcggacgcactaccaagagcgcttccgt
catattttgattgatgagtttcaagataccaatgccttgcaatacgcttggctcaaatta
ctatctggtcatgatgcgagtcgtgtcaatgtcagcggcatgggaagtagtgcagttttt
gcggtaggcgatgatgatcaaagtatttatgcattccgcggcgcagatgtggagaacatg
cgtttgtatgaaaagcaatatcacccgatgatggtcaagcttgagcagaactaccgctca
catggccacatcttagatacggccaattacctcatttccaataatacggatcgtctaggc
aagaacttgcgtaccgatgcaggtcatggtgagctcgttcgcatctatgatgcgccgagt
gatcatgctgaagctgcatggcttgtagatgaaattaaagccctggtgagtagtggtatc
aaacgcactgaaattgccttgctctacagaagcaatgctcagtcacgcattattgagcat
gccttattttctgcagcgattccatatcgggtttacggtggactgcgcttcttcgagcgc
gcagagattaaacatgccttagcgtatttacgtctgctagaaaatccgaatgacgacacc
tccttctcgcgcgtagtgaatttcccaacacgcggtattggtgcaagatcgattgaggct
gtgcaagatgcagctcgtgcacaaaatagttctttgtatttagcggcatcgacattagac
ggtaaagctggtgcctccttaggtggctttgtacgcctggtggaccatatgcgtgaagct
actcgttacaacacattgcctgagacagtggaattcgtgattcaaaacagtggtttgatt
cagcactacctttcagagcgcgaaggccaggaccgtgtagaaaacttacaagaattaatt
aacgctgcaaccgcatttattgcagaagaaggttatggtcaggatgccactgctgccaca
ttgcctggtgagaatgcccctggcgtagtcgaggtctcgccgttggctgcatttctctcg
cacgcttcacttgaggccggtgataaccaggcccaggcaggccaagatgctgtgcagctg
atgacagtgcactctgctaaaggcttggagttcacctctgtatttattactggcttagaa
gaggggttattcccacatgagaacagtattaatgagcagcatggtttagaagaagagcgt
cgcttaatgtatgtggcgattacacgcgcaaaagagcgcctctatctctctcacacacag
tcacggatgttgcacggtcaagttcgctacaacatgccatctcgcttcttagaagagttg
ccatgtgattcgctgaagtggctcactccaaaagtcaaagatgcccgttggggtggtact
ggcaatggaaatggcggtcgctcagggtcaacttggcaagatggctatacacgtcagcgt
gagtttggatcgaatgatttctttgacagtggtaatgaacgcgagcgacctgcaaggcaa
attggccgagtaggctctgcctcaaccgccgtaactagaatggccgcaccaccacgagga
aattacccatttacgattgggcaaaatgtattccacaccaagtttggtgaggggcgcgtt
acaggcctagagggtaatgatgctgatgcgcgcgctcaggtaaatttcaagcgccatggc
gtgaaatggctgcagctcagtattgctaagcttgctgcgatcgattaa
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