KEGG   Polynucleobacter duraquae: CL55_00017870
Entry
CL55_00017870     CDS       T04207                                 
Name
(GenBank) chaperonin GroL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
pdq  Polynucleobacter duraquae
Pathway
pdq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pdq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CL55_00017870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdq03019]
    CL55_00017870
   03110 Chaperones and folding catalysts [BR:pdq03110]
    CL55_00017870
   03029 Mitochondrial biogenesis [BR:pdq03029]
    CL55_00017870
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pdq04147]
    CL55_00017870
Enzymes [BR:pdq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     CL55_00017870
Messenger RNA biogenesis [BR:pdq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CL55_00017870
Chaperones and folding catalysts [BR:pdq03110]
 Heat shock proteins
  HSP60 / Chaperonin
   CL55_00017870
Mitochondrial biogenesis [BR:pdq03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    CL55_00017870
Exosome [BR:pdq04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CL55_00017870
  Exosomal proteins of other body fluids (saliva and urine)
   CL55_00017870
  Exosomal proteins of breast cancer cells
   CL55_00017870
  Exosomal proteins of colorectal cancer cells
   CL55_00017870
  Exosomal proteins of bladder cancer cells
   CL55_00017870
SSDB
Motif
Pfam: Cpn60_TCP1 NNH2
Other DBs
NCBI-ProteinID: AKD26120
UniProt: A0A0E3ZN34
LinkDB
Position
complement(1754710..1756362)
AA seq 550 aa
MAAKDVVFGDNARTKMVEGVNILANAVKVTLGPKGRNVVIERSFGGPIITKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTNDIAGDGTTTATVLAQSIVREGMKYVVSGHNPMDLKRGI
DKAVTAALEELKKISKPCTTTKEIAQVGSISANSDQSIGQRIAEAMEKVGKEGVITVEDG
KSLEDELEVVEGMQFDRGYLSPYFINQPEKQVAVLETPYVLLFDKKVSNIRDLLPVLEQV
AKSGRPLLIIAEDVEGEALATLVVNNIRGIIKTCAVKAPGFGDRRKAMLEDIAILTGGTV
IAEEIGLTLEKTTLEHLGQAKRIEIGKENTIIIDGAGDAKAIEARVKNIRVQIEEATSDY
DKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL
RAMQGIKGLKGDNPDQDAGISIVLRAMEEPIRIIVSNAGDEASVVVNAVLASKGNNGYNA
ATGEYGDLVAQGVIDPTKVTKTALVNAASVAALLLTTDCAICEAPKDDSAGGGMPDMGGM
GGMGGMGGMM
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggcagcaaaagacgtcgtatttggagataacgcccgtaccaagatggtagagggtgtc
aatattctcgcaaacgcagtaaaagtaactttaggaccaaagggtcgcaatgtggtgatc
gagcgttcatttggcggcccaatcatcactaaagatggtgtatccgtagcaaaagaaatc
gaacttaaagacaagctccagaacatgggtgctcagatggtgaaggaagttgcttctaaa
accaatgacatcgctggtgacggcaccactaccgctactgtattagctcagtctatcgtt
cgcgaaggcatgaaatacgtagtttcaggccacaatccaatggacttgaagcgcggtatc
gacaaagcagttacagcggcactcgaagagcttaagaaaattagcaagccttgcacaact
actaaagaaattgctcaagttggctctatctcggctaatagcgaccaaagtattggtcag
cgtattgctgaagcaatggaaaaagtaggtaaagaaggtgtaatcactgttgaagatggt
aagtctttggaagatgagcttgaagtagttgagggtatgcagtttgaccgcggttatctc
tctccatatttcattaaccaacctgaaaagcaagttgccgtattggaaactccgtacgtt
ctcttgtttgacaagaaagttagcaacatccgtgatttgctcccagtactcgagcaagta
gccaaatctggtcgtccattgttaatcattgcagaagatgttgaaggcgaagccttggca
actttggtcgtgaacaacattcgcggcatcatcaagacttgcgctgttaaggctccaggc
tttggggatcgtcgtaaagccatgttggaagacatcgcaatcttgactggcggtacagtc
attgctgaagaaatcggcctgacactcgagaaaacaactcttgagcacttaggtcaagct
aagcgtatcgaaattggtaaagaaaacaccatcatcattgacggtgctggcgatgctaaa
gcaatcgaagcgcgcgtgaagaacatccgtgttcagatcgaagaagcgactagcgactac
gacaaagagaaattgcaagagcgcgttgccaaattggcaggtggtgttgcagtgattcgt
gttggtgctgctactgaagtagaaatgaaagaaaagaaagaccgcgttgatgatgcattg
catgcaactcgtgcagcggttgaagaaggtattgttcctggcggtggcgtagctttgtta
cgtgcaatgcagggcattaaaggcttgaagggtgataaccccgaccaagacgctggtatc
agcatcgtattgcgtgcaatggaagagccaattcgtattatcgtttctaatgcaggagat
gaagccagcgtagttgtgaacgcagtattggcaagtaagggcaataacggttacaacgca
gcaactggtgaatacggcgacctcgtagctcaaggtgtgatcgatccaaccaaggtaaca
aaaactgcattagttaatgcggcatctgttgcagccttattgttgactaccgattgcgca
atttgcgaagccccaaaggatgattctgctggtggtggcatgcctgatatgggcggtatg
ggtggtatgggcggtatgggcggcatgatgtaa

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