Polynucleobacter duraquae: CL55_00017870
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Entry
CL55_00017870 CDS
T04207
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pdq
Polynucleobacter duraquae
Pathway
pdq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CL55_00017870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdq03019
]
CL55_00017870
03110 Chaperones and folding catalysts [BR:
pdq03110
]
CL55_00017870
03029 Mitochondrial biogenesis [BR:
pdq03029
]
CL55_00017870
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdq04147
]
CL55_00017870
Enzymes [BR:
pdq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CL55_00017870
Messenger RNA biogenesis [BR:
pdq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CL55_00017870
Chaperones and folding catalysts [BR:
pdq03110
]
Heat shock proteins
HSP60 / Chaperonin
CL55_00017870
Mitochondrial biogenesis [BR:
pdq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CL55_00017870
Exosome [BR:
pdq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CL55_00017870
Exosomal proteins of other body fluids (saliva and urine)
CL55_00017870
Exosomal proteins of breast cancer cells
CL55_00017870
Exosomal proteins of colorectal cancer cells
CL55_00017870
Exosomal proteins of bladder cancer cells
CL55_00017870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
AKD26120
UniProt:
A0A0E3ZN34
LinkDB
All DBs
Position
complement(1754710..1756362)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVVFGDNARTKMVEGVNILANAVKVTLGPKGRNVVIERSFGGPIITKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTNDIAGDGTTTATVLAQSIVREGMKYVVSGHNPMDLKRGI
DKAVTAALEELKKISKPCTTTKEIAQVGSISANSDQSIGQRIAEAMEKVGKEGVITVEDG
KSLEDELEVVEGMQFDRGYLSPYFINQPEKQVAVLETPYVLLFDKKVSNIRDLLPVLEQV
AKSGRPLLIIAEDVEGEALATLVVNNIRGIIKTCAVKAPGFGDRRKAMLEDIAILTGGTV
IAEEIGLTLEKTTLEHLGQAKRIEIGKENTIIIDGAGDAKAIEARVKNIRVQIEEATSDY
DKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL
RAMQGIKGLKGDNPDQDAGISIVLRAMEEPIRIIVSNAGDEASVVVNAVLASKGNNGYNA
ATGEYGDLVAQGVIDPTKVTKTALVNAASVAALLLTTDCAICEAPKDDSAGGGMPDMGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtcgtatttggagataacgcccgtaccaagatggtagagggtgtc
aatattctcgcaaacgcagtaaaagtaactttaggaccaaagggtcgcaatgtggtgatc
gagcgttcatttggcggcccaatcatcactaaagatggtgtatccgtagcaaaagaaatc
gaacttaaagacaagctccagaacatgggtgctcagatggtgaaggaagttgcttctaaa
accaatgacatcgctggtgacggcaccactaccgctactgtattagctcagtctatcgtt
cgcgaaggcatgaaatacgtagtttcaggccacaatccaatggacttgaagcgcggtatc
gacaaagcagttacagcggcactcgaagagcttaagaaaattagcaagccttgcacaact
actaaagaaattgctcaagttggctctatctcggctaatagcgaccaaagtattggtcag
cgtattgctgaagcaatggaaaaagtaggtaaagaaggtgtaatcactgttgaagatggt
aagtctttggaagatgagcttgaagtagttgagggtatgcagtttgaccgcggttatctc
tctccatatttcattaaccaacctgaaaagcaagttgccgtattggaaactccgtacgtt
ctcttgtttgacaagaaagttagcaacatccgtgatttgctcccagtactcgagcaagta
gccaaatctggtcgtccattgttaatcattgcagaagatgttgaaggcgaagccttggca
actttggtcgtgaacaacattcgcggcatcatcaagacttgcgctgttaaggctccaggc
tttggggatcgtcgtaaagccatgttggaagacatcgcaatcttgactggcggtacagtc
attgctgaagaaatcggcctgacactcgagaaaacaactcttgagcacttaggtcaagct
aagcgtatcgaaattggtaaagaaaacaccatcatcattgacggtgctggcgatgctaaa
gcaatcgaagcgcgcgtgaagaacatccgtgttcagatcgaagaagcgactagcgactac
gacaaagagaaattgcaagagcgcgttgccaaattggcaggtggtgttgcagtgattcgt
gttggtgctgctactgaagtagaaatgaaagaaaagaaagaccgcgttgatgatgcattg
catgcaactcgtgcagcggttgaagaaggtattgttcctggcggtggcgtagctttgtta
cgtgcaatgcagggcattaaaggcttgaagggtgataaccccgaccaagacgctggtatc
agcatcgtattgcgtgcaatggaagagccaattcgtattatcgtttctaatgcaggagat
gaagccagcgtagttgtgaacgcagtattggcaagtaagggcaataacggttacaacgca
gcaactggtgaatacggcgacctcgtagctcaaggtgtgatcgatccaaccaaggtaaca
aaaactgcattagttaatgcggcatctgttgcagccttattgttgactaccgattgcgca
atttgcgaagccccaaaggatgattctgctggtggtggcatgcctgatatgggcggtatg
ggtggtatgggcggtatgggcggcatgatgtaa
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